RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 TMEM178BH3BS89 294 aa21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 MED22Q15528 200 aa21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 PRSS48Q7RTY5 328 aa21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 CCDC54Q8NEL0 328 aa21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 NPRL2Q8WTW4 380 aa21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 LSM2Q9Y333 95 aaKnown RBP21.37■■□□□ 1.01
TMEM55B-202ENST00000398020 ZNF732B4DXR9 585 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 ZNF20P17024 532 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 MAP2K4P45985 399 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 UBE2V2Q15819 145 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 FAM201AQ5SY85 155 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 DMKNQ6E0U4 476 aaPredicted RBP21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 C11orf53Q8IXP5 236 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 TSEN15Q8WW01 171 aaKnown RBP21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 GHSRQ92847 366 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 RPL3LQ92901 407 aaKnown RBP21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 RAB1CQ92928 201 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 TIMD4Q96H15 378 aa21.36■■□□□ 1.01
TMEM55B-202ENST00000398020 hCG_1807616A0A1W2PRN6 198 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 ISPDA4D126 451 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 LRRC30A6NM36 301 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 CDIPTO14735 213 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 SPHARQ15513 63 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 PEG10Q86TG7 708 aaKnown RBP21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 BOLLQ8N9W6 283 aaKnown RBP21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 OR13C5Q8NGS8 318 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 TRMT10AQ8TBZ6 339 aaKnown RBP21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 Q8TCH9 128 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 ERGIC1Q969X5 290 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 SMR3AQ99954 134 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 CHST5Q9GZS9 411 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 METTL17Q9H7H0 456 aaPredicted RBP21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 NPTNQ9Y639 398 aa21.35■■□□□ 1.01
TMEM55B-202ENST00000398020 INHBBP09529 407 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 IRF2P14316 349 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 CELP19835 753 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 SOX2P48431 317 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 TAS2R43P59537 309 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 LOXL1Q08397 574 aaPredicted RBP21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 C19orf18Q8NEA5 215 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 OR5A2Q8NGI9 324 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 OR11L1Q8NGX0 322 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 DHDHQ9UQ10 334 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 MED13LQ71F56 2210 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 TEP1Q99973 2627 aaKnown RBP21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 IL2RGP31785 369 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 GNG3P63215 75 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 ZMYND11Q15326 602 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 HPS1Q92902 700 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 C10orf35Q96D05 121 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 PGLYRP3Q96LB9 341 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 ZNF281Q9Y2X9 895 aa21.34■■□□□ 1.01
TMEM55B-202ENST00000398020 TMEM210A6NLX4 147 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 IFNL4K9M1U5 179 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 GABARAPL2P60520 117 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 ZNF181Q2M3W8 571 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 FAM76BQ5HYJ3 339 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 SCCPDHQ8NBX0 429 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 CLDND2Q8NHS1 167 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 PP6455Q8WZ26 134 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 RNF7Q9UBF6 113 aa21.33■■□□□ 1
TMEM55B-202ENST00000398020 FAM230AA0A1W2PPH8 454 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 OR5B21A6NL26 309 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 C3orf80F5H4A9 247 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 SERPINA3P01011 423 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 IGHV2-70P01814 119 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 BTG1P62324 171 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 WDR82Q6UXN9 313 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 C1orf87Q8N0U7 546 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 GPR148Q8TDV2 347 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 TLNRD1Q9H1K6 362 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 OR51I2Q9H344 312 aa21.32■■□□□ 1
TMEM55B-202ENST00000398020 GATBO75879 557 aaKnown RBP21.31■■□□□ 1
TMEM55B-202ENST00000398020 HSMCR30P0CW71 290 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 CHN2P52757 468 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 OR13C9Q8NGT0 318 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 IGKV1-9A0A0C4DH69 117 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 PQLC2LA1A4F0 135 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 PLPP2O43688 288 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 OCM2P0CE71 109 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 GMFBP60983 142 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 HAGHLQ6PII5 290 aaPredicted RBP21.31■■□□□ 1
TMEM55B-202ENST00000398020 GCSAMQ8N6F7 178 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 LRRC29Q8WV35 223 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 GAL3ST1Q99999 423 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 YTHDF1Q9BYJ9 559 aaKnown RBP21.31■■□□□ 1
TMEM55B-202ENST00000398020 SLC7A11Q9UPY5 501 aa21.31■■□□□ 1
TMEM55B-202ENST00000398020 RHBDL1O75783 438 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 RPSAP08865 295 aaKnown RBP21.3■■□□□ 1
TMEM55B-202ENST00000398020 EGR1P18146 543 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 CD80P33681 288 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 HAAOP46952 286 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 RPS11P62280 158 aaKnown RBP eCLIP21.3■■□□□ 1
TMEM55B-202ENST00000398020 BDH1Q02338 343 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 ACSM1Q08AH1 577 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 TMEM249Q2WGJ8 235 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 SFRP4Q6FHJ7 346 aaPredicted RBP21.3■■□□□ 1
TMEM55B-202ENST00000398020 DEFB108BQ8NET1 73 aa21.3■■□□□ 1
TMEM55B-202ENST00000398020 TLN2Q9Y4G6 2542 aa21.29■■□□□ 1
TMEM55B-202ENST00000398020 CSPG4Q6UVK1 2322 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms