RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 C11orf53Q8IXP5 236 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 MUC20Q8N307 709 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF676Q8N7Q3 588 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 C19orf18Q8NEA5 215 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 HAVCR2Q8TDQ0 301 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 C1orf159Q96HA4 380 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 TLNRD1Q9H1K6 362 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 METTL17Q9H7H0 456 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 PPIAL4AQ9Y536 164 aa17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 FN1P02751 2386 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-206ENST00000397408 OR5B21A6NL26 309 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 ZNF732B4DXR9 585 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 CDIPTO14735 213 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 CCDC159P0C7I6 412 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 CD80P33681 288 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 TGM4P49221 684 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 GTF2A1P52655 376 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 GNG3P63215 75 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 LINC01356Q8N9X3 169 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 OR10AC1Q8NH08 325 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 OR52N1Q8NH53 320 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 RPL3LQ92901 407 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 LPAR2Q9HBW0 351 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 FKBP14Q9NWM8 211 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 HHLA2Q9UM44 414 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 PCDHB10Q9UN67 800 aa17.78■□□□□ 0.44
TSPAN4-206ENST00000397408 ANKRD61A6NGH8 418 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 ZFPL1O95159 310 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 TGFAP01135 160 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 C21orf33P30042 268 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 XAF1Q6GPH4 301 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 WDR82Q6UXN9 313 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 GCSAMQ8N6F7 178 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 OR5A2Q8NGI9 324 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 OR51A4Q8NGJ6 313 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 LRRC29Q8WV35 223 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 CNBD2Q96M20 576 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 PDCD1LG2Q9BQ51 273 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 COMMD4Q9H0A8 199 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 TMEM165Q9HC07 324 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 SCN3BQ9NY72 215 aa17.77■□□□□ 0.44
TSPAN4-206ENST00000397408 SETD2Q9BYW2 2564 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 TRBV2A0A0J9YWF9 115 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 TMEM212A6NML5 194 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 CEACAM18A8MTB9 384 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 A8MV72 311 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 B4DSR2 109 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 INAFM1C9JVW0 142 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 EGR1P18146 543 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 ZNF404Q494X3 552 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 FAM76BQ5HYJ3 339 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 FAM166AQ6J272 317 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 SCCPDHQ8NBX0 429 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 DEFB108BQ8NET1 73 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 OR5AK2Q8NH90 309 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 GATAD2BQ8WXI9 593 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 C10orf35Q96D05 121 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 CHST5Q9GZS9 411 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 PATZ1Q9HBE1 687 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 RAB26Q9ULW5 256 aa17.76■□□□□ 0.43
TSPAN4-206ENST00000397408 PTGES3LE9PB15 166 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 C3orf80F5H4A9 247 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 LGALS8O00214 317 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 MYL12BO14950 172 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 RRP9O43818 475 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 GATBO75879 557 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 FSTL3O95633 263 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 MSMBP08118 114 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 ZNF20P17024 532 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 CDK5R1Q15078 307 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 SFRP4Q6FHJ7 346 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 RPL22L1Q6P5R6 122 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 OR13C3Q8NGS6 347 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 ADAT3Q96EY9 351 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 TMEM246Q9BRR3 403 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 OR51I2Q9H344 312 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 BABAM2Q9NXR7 383 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 ERVK-18Q9QC07 812 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 KCNS2Q9ULS6 477 aa17.75■□□□□ 0.43
TSPAN4-206ENST00000397408 LALBAP00709 142 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 LHBP01229 141 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 CDK1P06493 297 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 RPS2P15880 293 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 CCDC58Q4VC31 144 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 ZNF485Q8NCK3 441 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 OR51F2Q8NH61 342 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 TRMT10AQ8TBZ6 339 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 NPRL2Q8WTW4 380 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 PP6455Q8WZ26 134 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 ZNF184Q99676 751 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 TRIM36Q9NQ86 728 aa17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 PAK1IP1Q9NWT1 392 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-206ENST00000397408 PQLC2LA1A4F0 135 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 OOEPA6NGQ2 149 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 F5H0A9 414 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 CFHR2P36980 270 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 UBE2V2Q15819 145 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 HAGHLQ6PII5 290 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 SGCDQ92629 289 aa17.73■□□□□ 0.43
TSPAN4-206ENST00000397408 MYDGFQ969H8 173 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms