RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SMAD4Q13485 552 aaKnown RBP12.22□□□□□ -0.45
NUP98-204ENST00000397004 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 COMMD2Q86X83 199 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 NFAM1Q8NET5 270 aaPredicted RBP12.22□□□□□ -0.45
NUP98-204ENST00000397004 KCNG3Q8TAE7 436 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 MRPL24Q96A35 216 aaKnown RBP12.22□□□□□ -0.45
NUP98-204ENST00000397004 KIRREL1Q96J84 757 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 ZNF20P17024 532 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 CCL1P22362 96 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 PRSS12P56730 875 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 TMEM33P57088 247 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 DNM1P34Q6PK57 102 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 KLHL24Q6TFL4 600 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 ATPIF1Q9UII2 106 aa12.22□□□□□ -0.45
NUP98-204ENST00000397004 FOLR2P14207 255 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.45
NUP98-204ENST00000397004 PHYHD1Q5SRE7 291 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 Q6ZRG5 221 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 PECRQ9BY49 303 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 CHRNA10Q9GZZ6 450 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 UCK1Q9HA47 277 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 SPAG17Q6Q759 2223 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 HCKP08631 526 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
NUP98-204ENST00000397004 KISS1Q15726 138 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 C20orf24Q9BUV8 137 aa12.21□□□□□ -0.45
NUP98-204ENST00000397004 ZNF878C9JN71 531 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 TIAF1O95411 115 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 BLKP51451 505 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 CSNK2A1P68400 391 aaPredicted RBP12.21□□□□□ -0.46
NUP98-204ENST00000397004 SLC25A47Q6Q0C1 308 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 Q6ZPA2 131 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 CSNK2A3Q8NEV1 391 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 STARD10Q9Y365 291 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 WIF1Q9Y5W5 379 aa12.21□□□□□ -0.46
NUP98-204ENST00000397004 A0A1W2PNV4 684 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 A6NLC8 198 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 PRSS44E7EML9 344 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 IGLV3-1P01715 115 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 GLI4P10075 376 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 NAT2P11245 290 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 RRADP55042 308 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 ARFRP1Q13795 201 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 IAH1Q2TAA2 248 aaPredicted RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 SP6Q3SY56 376 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 GALNTL5Q7Z4T8 443 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 OR10H5Q8NGA6 315 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 OR51T1Q8NGJ9 327 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 CDC6Q99741 560 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 OR10A2Q9H208 303 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 DNAJB11Q9UBS4 358 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 RPH3AQ9Y2J0 694 aaPredicted RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 FIGNL2A6NMB9 653 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 DEDDO75618 318 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 CPT2P23786 658 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 ACKR3P25106 362 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 LMO1P25800 156 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 ZNF239Q16600 458 aaKnown RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 LCN10Q6JVE6 187 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 HPSE2Q8WWQ2 592 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 EDARADDQ8WWZ3 215 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 OR5B2Q96R09 309 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 RSRP1Q9BUV0 290 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 STMND1H3BQB6 276 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 APOC1P02654 83 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 FCGR2CP31995 323 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 APOBEC1P41238 236 aaKnown RBP12.2□□□□□ -0.46
NUP98-204ENST00000397004 HIST3H3Q16695 136 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 PLPPR5Q32ZL2 321 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 TSPO2Q5TGU0 170 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 NOXO1Q8NFA2 376 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 RNF138Q8WVD3 245 aa12.2□□□□□ -0.46
NUP98-204ENST00000397004 SERPINA2P20848 420 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 GABREP78334 506 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 SEMA6DQ8NFY4 1073 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 MARS2Q96GW9 593 aaKnown RBP12.19□□□□□ -0.46
NUP98-204ENST00000397004 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 B3GALT5Q9Y2C3 310 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 IGHV1OR21-1A0A087WYE8 117 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 FAHP16930 419 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 AGAP20933 346 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 C17orf67Q0P5P2 114 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 TMEM234Q8WY98 164 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms