RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.96□□□□□ -0.17
GNE-202ENST00000396594 MTFP1Q9UDX5 166 aa13.96□□□□□ -0.17
GNE-202ENST00000396594 LIPT2A6NK58 231 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 CYTIPO60759 359 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 LRP3O75074 770 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 NPBWR1P48145 328 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 STARD6P59095 220 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.18
GNE-202ENST00000396594 THNSL2Q86YJ6 484 aa13.96□□□□□ -0.18
GNE-202ENST00000396594 RFPL4AA6NLU0 287 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 RFPL4AL1F8VTS6 287 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 PTGFRP43088 359 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 GPNMBQ14956 572 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 BHLHA15Q7RTS1 189 aaPredicted RBP13.95□□□□□ -0.18
GNE-202ENST00000396594 RHOFQ9HBH0 211 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 ADGRL4Q9HBW9 690 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 GAR1Q9NY12 217 aaKnown RBP13.95□□□□□ -0.18
GNE-202ENST00000396594 ASPDHA6ND91 283 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 CD200P41217 278 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 ID4P47928 161 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 PPP1CBP62140 327 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 FOXO1Q12778 655 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 ALKAL2Q6UX46 152 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 BHLHE23Q8NDY6 225 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 OR4C3Q8NH37 302 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 RDH5Q92781 318 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 ZNF629Q9UEG4 869 aaPredicted RBP13.95□□□□□ -0.18
GNE-202ENST00000396594 F10P00742 488 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 SSTR2P30874 369 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 HRH1P35367 487 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 CORO6Q6QEF8 472 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 HSD17B11Q8NBQ5 300 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 OR1L4Q8NGR5 311 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 ZDHHC16Q969W1 377 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 A0A0U1RQK1 487 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 TO15178 435 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 BRS3P32247 399 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 FZD5Q13467 585 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 MSRB3Q8IXL7 192 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 TGIF2Q9GZN2 237 aa13.95□□□□□ -0.18
GNE-202ENST00000396594 TIMM8BQ9Y5J9 83 aaPredicted RBP13.95□□□□□ -0.18
GNE-202ENST00000396594 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 H7BYZ3 331 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 DEFB124Q8NES8 71 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 TM4SF19Q96DZ7 209 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 MRPS18AQ9NVS2 196 aaKnown RBP13.94□□□□□ -0.18
GNE-202ENST00000396594 MED9Q9NWA0 146 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 YTHDF2Q9Y5A9 579 aaKnown RBP13.94□□□□□ -0.18
GNE-202ENST00000396594 PUS1Q9Y606 427 aaKnown RBP eCLIP13.94□□□□□ -0.18
GNE-202ENST00000396594 WDR1O75083 606 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 SNCGO76070 127 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 SPP1P10451 314 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 PRDX4Q13162 271 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 KISS1Q15726 138 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 TCTEX1D1Q8N7M0 179 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 RND1Q92730 232 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 ZNF225Q9UK10 706 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 A0A096LPE4 126 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 A0A1W2PPZ6 126 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
GNE-202ENST00000396594 C1QAP02745 245 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 ZNF883P0CG24 379 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 CNN1P51911 297 aaKnown RBP13.94□□□□□ -0.18
GNE-202ENST00000396594 OLIG3Q7RTU3 272 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 GPR32P1Q8NGA4 272 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 SLC25A40Q8TBP6 338 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 DERL3Q96Q80 235 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 GINS3Q9BRX5 216 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 MLF1P58340 268 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 OR8G2PQ6IF36 304 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 TMEM179BQ7Z7N9 219 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 SFT2D1Q8WV19 159 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 RASL10BQ96S79 203 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 UFSP2Q9NUQ7 469 aa13.94□□□□□ -0.18
GNE-202ENST00000396594 ATAD5Q96QE3 1844 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 J3QW42 95 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 CLEC3BP05452 202 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 H3F3AP84243 136 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 RPL7L1Q6DKI1 246 aaKnown RBP13.93□□□□□ -0.18
GNE-202ENST00000396594 C17orf107Q6ZR85 190 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 MS4A5Q9H3V2 200 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 SFT2D2O95562 160 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 NGFP01138 241 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 IGHV3-9P01782 118 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 IGHA1P01876 353 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 GNB2P62879 340 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 WDR38Q5JTN6 314 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 DHRS13Q6UX07 377 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 C20orf196Q8IYI0 205 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 SEBOXQ9HB31 216 aaPredicted RBP13.93□□□□□ -0.18
GNE-202ENST00000396594 CYR61O00622 381 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 COX7A2P2O60397 106 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 FAM157BP0CG42 384 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 CA5BP1Q8WTZ4 195 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 GNB4Q9HAV0 340 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 SLC45A2Q9UMX9 530 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 PPP1R3CQ9UQK1 317 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 ATP6V1G2-DDX39BF2Z307 99 aa13.93□□□□□ -0.18
GNE-202ENST00000396594 TRIM77I1YAP6 450 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms