RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SPICQ8N5J4 248 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 NAXEQ8NCW5 288 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR10R2Q8NGX6 335 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GALMQ96C23 342 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CIB3Q96Q77 187 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 C11orf54Q9H0W9 315 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 AMDHD2Q9Y303 409 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TMED3Q9Y3Q3 217 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CHD6Q8TD26 2715 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CYTIPO60759 359 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SEMA7AO75326 666 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 DBHP09172 617 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PRKACAP17612 351 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TNFSF10P50591 281 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 RPL23AP62750 156 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF92Q03936 586 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PXDC1Q5TGL8 231 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 NFAM1Q8NET5 270 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 ERGIC1Q969X5 290 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SLC2A8Q9NY64 477 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LUZP4Q9P127 313 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 KMT2EQ8IZD2 1858 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 A0A1B0GVG6 124 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZC3H12DA2A288 527 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 HRKO00198 91 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SLC2A10O95528 541 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IGKV1D-16P01601 117 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF32P17041 273 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CHRNB4P30926 498 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 KCNMB1Q16558 191 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PHYHIPLQ96FC7 376 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 MAP6Q96JE9 813 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FXYD6-FXYD2A0A087WZ82 144 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR2W5A6NFC9 320 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 TERTO14746 1132 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 VEGFCP49767 419 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IGF2-ASQ6U949 168 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 ACOT7LQ6ZUV0 252 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 OR8H3Q8N146 312 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FAM83FQ8NEG4 500 aaPredicted RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 SLC39A7Q92504 469 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FXYD6Q9H0Q3 95 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 FRRS1LQ9P0K9 344 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 PDCD6O75340 191 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 DFFBO76075 338 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 IFNA5P01569 189 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 CSF3P09919 207 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SIAH3Q8IW03 269 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 SCGB1C1Q8TD33 95 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 GTF3AQ92664 365 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 AUNIPQ9H7T9 357 aa3□□□□□ -1.93
VPS13C-203ENST00000395896 LIN7CQ9NUP9 197 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 LSM2Q9Y333 95 aaKnown RBP3□□□□□ -1.93
VPS13C-203ENST00000395896 GZMHP20718 246 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HAAOP46952 286 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FAM76BQ5HYJ3 339 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FAM199XQ6PEV8 388 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GDPD3Q7L5L3 318 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SLC30A7Q8NEW0 376 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OR5D13Q8NGL4 314 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OR51E1Q8TCB6 317 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 HGDQ93099 445 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PPP1R3EQ9H7J1 279 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DYNLRB1Q9NP97 96 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM100Q9NV29 134 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 LPAR3Q9UBY5 353 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 DTX4Q9Y2E6 619 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PCDHGA9Q9Y5G4 932 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TANC2Q9HCD6 1990 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NBEAL1Q6ZS30 2694 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NME2P1O60361 137 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 VDAC1P21796 283 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 NME2P22392 152 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TGM1P22735 817 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ZBTB25P24278 435 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 PTAFRP25105 342 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 S100A11P31949 105 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 H3F3AP84243 136 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 C1orf100Q5SVJ3 147 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SPINK14Q6IE38 97 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FBXW12Q6X9E4 464 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 Q6ZT83 130 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OLIG3Q7RTU3 272 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CCDC86Q9H6F5 360 aaKnown RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 OR6C3Q9NZP0 311 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FBLN5Q9UBX5 448 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 P2RY10O00398 339 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 MAGEB4O15481 346 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CTSSP25774 331 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 VAX1Q5SQQ9 334 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GPX8Q8TED1 209 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 TREM2Q9NZC2 230 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 R4GN57 208 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 ATG2AQ2TAZ0 1938 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 SMIM30A4D0T7 59 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 FAM166BA8MTA8 275 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 C4orf51C9J302 202 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 GMDSO60547 372 aa2.99□□□□□ -1.93
VPS13C-203ENST00000395896 IGFBP1P08833 259 aaPredicted RBP2.99□□□□□ -1.93
VPS13C-203ENST00000395896 CCL3P10147 92 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms