RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PPP1CCP36873 323 aaKnown RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 SULT1A2P50226 295 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 HSF1Q00613 529 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 PNLIPRP3Q17RR3 467 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ACTBL2Q562R1 376 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 TMEM182Q6ZP80 229 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 Q6ZS52 159 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 DTWD2Q8NBA8 298 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ADIPOR1Q96A54 375 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF775Q96BV0 537 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 SLC46A1Q96NT5 459 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 CDCA3Q99618 268 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 CD207Q9UJ71 328 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 C14orf166Q9Y224 244 aaKnown RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 TMEM14DPA8MWL7 114 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 E9PLN8 166 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 F5H5K5 113 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 GLP1RP43220 463 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 SLC6A8P48029 635 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 NHLH2Q02577 135 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 PLXDC2Q6UX71 529 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 SAT2Q96F10 170 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-203ENST00000395060 HSPB2A8KAH6 182 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 DDAH2O95865 285 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 HSPB2Q16082 182 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 GGNBP1Q5YKI7 109 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 FAM180AQ6UWF9 173 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 OR8B12Q8NGG6 310 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 MFSD8Q8NHS3 518 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 ABHD14AQ9BUJ0 271 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
CLIP2-203ENST00000395060 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
CLIP2-203ENST00000395060 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 SHANK1Q9Y566 2161 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 CST4P01036 141 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 PET100P0DJ07 73 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 HAAOP46952 286 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 P4HA3Q7Z4N8 544 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 GPBAR1Q8TDU6 330 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF721Q8TF20 911 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 RNF133Q8WVZ7 376 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 TCTEX1D2Q8WW35 142 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 ASB10Q8WXI3 467 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 KCNJ16Q9NPI9 418 aa12.62□□□□□ -0.39
CLIP2-203ENST00000395060 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 DHRS7CA6NNS2 312 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 ANGPTL7O43827 346 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 SEMA4FO95754 770 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 MT-ATP6P00846 226 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 ISG15P05161 165 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 GABRG2P18507 467 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 FPR2P25090 351 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 SFTPDP35247 375 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 IGLV3-21P80748 117 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 OR2B11Q5JQS5 317 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 KPTNQ9Y664 436 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 RAMP1O60894 148 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 IFNA2P01563 188 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 HPNP05981 417 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 KLK3P07288 261 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 PEG10Q86TG7 708 aaKnown RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 C17orf78Q8N4C9 275 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 OR2AJ1Q8NGZ0 328 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 PRRX2Q99811 253 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 LANCL2Q9NS86 450 aa12.61□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF107Q9UII5 783 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-203ENST00000395060 TMEM225BP0DP42 221 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 FAHP16930 419 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 MMP16P51512 607 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 DEFB133Q30KQ1 61 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF529Q6P280 563 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 OGFOD3Q6PK18 319 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
CLIP2-203ENST00000395060 GRINAQ7Z429 371 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 KCNG3Q8TAE7 436 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 GGACTQ9BVM4 153 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 PARPBPQ9NWS1 579 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 MEMO1Q9Y316 297 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 KIR2DS5A0A0G2JLQ3 304 aa12.6□□□□□ -0.39
CLIP2-203ENST00000395060 A0A0G2JNG1 304 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms