RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 BCL2L11O43521 198 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-202ENST00000394888 SNAPC5O75971 98 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 SCGNO76038 276 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 CRHP06850 196 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 MMP7P09237 267 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-202ENST00000394888 BAMBIQ13145 260 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 ZSCAN4Q8NAM6 433 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-202ENST00000394888 SF3B5Q9BWJ5 86 aaKnown RBP13.39□□□□□ -0.27
CPSF7-202ENST00000394888 MSGN1A6NI15 193 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 M0R135 149 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 VAMP5O95183 116 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 PI3P19957 117 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 SRD5A2P31213 254 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 NPY4RP50391 375 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 NSUN5P2Q63ZY6 315 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 ZNF774Q6NX45 483 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 CT55Q8WUE5 264 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 C17orf50Q8WW18 174 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 ZNF799Q96GE5 643 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 OR10C1Q96KK4 312 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 PIGLQ9Y2B2 252 aa13.39□□□□□ -0.27
CPSF7-202ENST00000394888 TRIM77I1YAP6 450 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 ADAP1O75689 374 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 STARP49675 285 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 IL13RA1P78552 427 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 C1orf210Q8IVY1 113 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 WNT5BQ9H1J7 359 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 OR10A2Q9H208 303 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 SLC39A1Q9NY26 324 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 GPN3Q9UHW5 284 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-202ENST00000394888 NOP16Q9Y3C1 178 aaKnown RBP13.38□□□□□ -0.27
CPSF7-202ENST00000394888 MED13Q9UHV7 2174 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 C9orf172C9J069 976 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 GP1BAP07359 652 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 HCKP08631 526 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 EDN3P14138 238 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 ZNF528Q3MIS6 628 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 BEX5Q5H9J7 111 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 PIGTQ969N2 578 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 PGAM5Q96HS1 289 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 COQ3Q9NZJ6 369 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 KLK3P07288 261 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-202ENST00000394888 AKR1C4P17516 323 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 C6orf201Q7Z4U5 140 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-202ENST00000394888 ARRDC1Q8N5I2 433 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 VRK1Q99986 396 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-202ENST00000394888 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
CPSF7-202ENST00000394888 DNPH1O43598 174 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 PSG4Q00888 419 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 TAF13Q15543 124 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 RPUSD3Q6P087 351 aaKnown RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 OR56B1Q8NGI3 324 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 PP6455Q8WZ26 134 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 MARS2Q96GW9 593 aaKnown RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 ZNF845Q96IR2 970 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 RBM24Q9BX46 236 aaKnown RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 NMES1Q9C002 83 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 HPF1Q9NWY4 346 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 SDCBPO00560 298 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 SFT2D2O95562 160 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 CST2P09228 141 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 UBBP0CG47 229 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 PTGER4P35408 488 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 SERPINF1P36955 418 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 LRRC37A5PQ49AS3 106 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 TMEM128Q5BJH2 165 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 DRAM2Q6UX65 266 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 LRRC20Q8TCA0 184 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 JSRP1Q96MG2 331 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-202ENST00000394888 IFT46Q9NQC8 304 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 NEURL1O76050 574 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 OR2F2O95006 317 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 FPR2P25090 351 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 FOLR3P41439 243 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 OR2F1Q13607 317 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 COMMD2Q86X83 199 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 OR5AC2Q9NZP5 309 aa13.37□□□□□ -0.27
CPSF7-202ENST00000394888 CA11O75493 328 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 CER1O95813 267 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 CELA3AP09093 270 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 GLRA1P23415 457 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 RAB35Q15286 201 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 C11orf88Q6PI97 169 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 CPEB3Q8NE35 698 aaKnown RBP13.36□□□□□ -0.27
CPSF7-202ENST00000394888 INTS12Q96CB8 462 aaKnown RBP13.36□□□□□ -0.27
CPSF7-202ENST00000394888 ALKBH3Q96Q83 286 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-202ENST00000394888 MRPS18CQ9Y3D5 142 aaKnown RBP13.36□□□□□ -0.27
CPSF7-202ENST00000394888 A0A0D9SG52 128 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 hCG_38984A0A1B0GV85 526 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 B8ZZF3 427 aa13.36□□□□□ -0.27
CPSF7-202ENST00000394888 NPIPA2E9PIF3 369 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms