RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PRRX2Q99811 253 aa8.85□□□□□ -0.99
UBE2D3-208ENST00000394803 ZNF768Q9H5H4 540 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-208ENST00000394803 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
UBE2D3-208ENST00000394803 LUZP4Q9P127 313 aa8.85□□□□□ -0.99
UBE2D3-208ENST00000394803 NSG2Q9Y328 171 aa8.85□□□□□ -0.99
UBE2D3-208ENST00000394803 A0A087WZY1 265 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 TRBV11-1A0A0K0K1C0 115 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 FOXI3A8MTJ6 420 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 RAD51DO75771 328 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 ZFAND5O76080 213 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 HTR3BO95264 441 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 TSPAN15O95858 294 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 IGLV3-1P01715 115 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 CRYBA1P05813 215 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 S100A6P06703 90 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 QDPRP09417 244 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 RPS2P15880 293 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 MSR1P21757 451 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 FCGR2CP31995 323 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 EFNA3P52797 238 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SUCLG1P53597 346 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 NXPH1P58417 271 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 RPL7L1Q6DKI1 246 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 Q6ZSR3 168 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 TMPPEQ6ZT21 453 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SFT2D1Q8WV19 159 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 HAS2Q92819 552 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 NUDT22Q9BRQ3 303 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 PBDC1Q9BVG4 233 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 CHST5Q9GZS9 411 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SMDT1Q9H4I9 107 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 V9GYS6 101 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 AQP7P3A6NL99 342 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 VAMP5O95183 116 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 MT-ND4LP03901 98 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SERPINA5P05154 406 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 HPNP05981 417 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SPP1P10451 314 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 GLRA1P23415 457 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 DTYMKP23919 212 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 PTAFRP25105 342 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 LPAR6P43657 344 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 RBM39Q14498 530 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 PLXDC2Q6UX71 529 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 Q6ZRG5 221 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 ZNF561Q8N587 486 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SPTSSAQ969W0 71 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SPSB1Q96BD6 273 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 INTS12Q96CB8 462 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SPACA5Q96QH8 159 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 SUCNR1Q9BXA5 334 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 EGLN1Q9GZT9 426 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 NELFAQ9H3P2 528 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 TMEM231Q9H6L2 316 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 ACKR4Q9NPB9 350 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 PNRC2Q9NPJ4 139 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 DECR2Q9NUI1 292 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 ZNF701Q9NV72 531 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 NECAP2Q9NVZ3 263 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 PLEKHJ1Q9NW61 149 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 HSF4Q9ULV5 492 aa8.84□□□□□ -0.99
UBE2D3-208ENST00000394803 TP53I11O14683 189 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 KCNAB3O43448 404 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 EIF1BO60739 113 aaKnown RBP8.83□□□□□ -1
UBE2D3-208ENST00000394803 PIAS2O75928 621 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 KNG1P01042 644 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 ZNF708P17019 499 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 NME2P22392 152 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 CD80P33681 288 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 PMELP40967 661 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
UBE2D3-208ENST00000394803 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
UBE2D3-208ENST00000394803 ABCA11PQ4W5N1 156 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 C10orf128Q5T292 105 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 SLC38A9Q8NBW4 561 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 SEMA6DQ8NFY4 1073 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 OR51F2Q8NH61 342 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 SYT3Q9BQG1 590 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 ADAT1Q9BUB4 502 aaKnown RBP8.83□□□□□ -1
UBE2D3-208ENST00000394803 RGCCQ9H4X1 137 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 FBXL17Q9UF56 701 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 PADI1Q9ULC6 663 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 TIMM10BQ9Y5J6 103 aa8.83□□□□□ -1
UBE2D3-208ENST00000394803 STMND1H3BQB6 276 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 SDCBPO00560 298 aaPredicted RBP8.82□□□□□ -1
UBE2D3-208ENST00000394803 GPR137BO60478 399 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 FCGR2AP12318 317 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 ZNF17P17021 662 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 PI3P19957 117 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 SERPINA2P20848 420 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 PTGER4P35408 488 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 CSNK1A1P48729 337 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 RAB1AP62820 205 aa8.82□□□□□ -1
UBE2D3-208ENST00000394803 DLX2Q07687 328 aaPredicted RBP8.82□□□□□ -1
UBE2D3-208ENST00000394803 SMAD4Q13485 552 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms