RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
GPC3-202ENST00000394299 BLVRBP30043 206 aaPredicted RBP13.09□□□□□ -0.31
GPC3-202ENST00000394299 GSK3AP49840 483 aa13.09□□□□□ -0.31
GPC3-202ENST00000394299 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
GPC3-202ENST00000394299 ST6GALNAC5Q9BVH7 336 aa13.09□□□□□ -0.31
GPC3-202ENST00000394299 CRIM1Q9NZV1 1036 aa13.09□□□□□ -0.31
GPC3-202ENST00000394299 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
GPC3-202ENST00000394299 CD79AP11912 226 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 SPINK2P20155 84 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 GABRR1P24046 479 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 PCBD1P61457 104 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 MICBQ29980 383 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 FAM109AQ8N4B1 249 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 FTMTQ8N4E7 242 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 OR2AK2Q8NG84 335 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 FBXW5Q969U6 566 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 WDYHV1Q96HA8 205 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 FN3KRPQ9HA64 309 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 UBE2QL1A1L167 161 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 MFNGO00587 321 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 ZNF35P13682 527 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 TNFSF10P50591 281 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 ARFRP1Q13795 201 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 BRICD5Q6PL45 260 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 C6orf201Q7Z4U5 140 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 PIGCQ92535 297 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 APH1AQ96BI3 265 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 S100A13Q99584 98 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 MICU1Q9BPX6 476 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 URM1Q9BTM9 101 aaKnown RBP13.08□□□□□ -0.32
GPC3-202ENST00000394299 CST11Q9H112 138 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 BCO1Q9HAY6 547 aa13.08□□□□□ -0.32
GPC3-202ENST00000394299 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 hCG_38984A0A1B0GV85 526 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 DISC1C4P0D8 188 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 HTR3BO95264 441 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 NRASP01111 189 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 ZNF81P51508 661 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 TSPAN5P62079 268 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 PDCD1Q15116 288 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 ZNF100Q8IYN0 542 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
GPC3-202ENST00000394299 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 GPR137Q96N19 417 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 SLC25A21Q9BQT8 299 aaPredicted RBP13.07□□□□□ -0.32
GPC3-202ENST00000394299 LINC00470Q9BZP3 86 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 ACKR4Q9NPB9 350 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 AKAP13Q12802 2813 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 FOXI3A8MTJ6 420 aaPredicted RBP13.07□□□□□ -0.32
GPC3-202ENST00000394299 OR2A4O95047 310 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 UBBP0CG47 229 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 HTR2BP41595 481 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 HLXQ14774 488 aaPredicted RBP13.07□□□□□ -0.32
GPC3-202ENST00000394299 MOB3CQ70IA8 216 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 MCEMP1Q8IX19 187 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 HDHD3Q9BSH5 251 aaPredicted RBP13.07□□□□□ -0.32
GPC3-202ENST00000394299 PECRQ9BY49 303 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 HEXA-AS1Q9H8Q6 139 aa13.07□□□□□ -0.32
GPC3-202ENST00000394299 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 SDCBPO00560 298 aaPredicted RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 ALX3O95076 343 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 NGFP01138 241 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 ALDH3B1P43353 468 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 SOX8P57073 446 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 TAF9Q16594 264 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 HIKESHIQ53FT3 197 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 NKAPLQ5M9Q1 402 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 LILRB4Q8NHJ6 448 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 FAM117AQ9C073 453 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 DCHS1Q96JQ0 3298 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 SCGNO76038 276 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 SLC22A5O76082 557 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 RAB1AP62820 205 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 DHRS2Q13268 280 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 MEF2DQ14814 521 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 MARCH1Q8TCQ1 289 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 C10orf35Q96D05 121 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 ALX4Q9H161 411 aaPredicted RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 OR51B6Q9H340 312 aa13.06□□□□□ -0.32
GPC3-202ENST00000394299 ZNF107Q9UII5 783 aaPredicted RBP13.06□□□□□ -0.32
GPC3-202ENST00000394299 IGKV1D-8A0A087WSZ0 117 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 ZNF724A8MTY0 619 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 RPL36A-HNRNPH2H7BZ11 118 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
GPC3-202ENST00000394299 MPC2O95563 127 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 ACTL6AO96019 429 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 IFNA6P05013 189 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 GIPP09681 153 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms