RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 LOC101059948A0A1B0GTJ6 334 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 DVL1O14640 695 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 SOCS1O15524 211 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 TNFSF14O43557 240 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 CRYZL1O95825 349 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 EPPINO95925 133 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 ZFP36L2P47974 494 aaKnown RBP8.09□□□□□ -1.11
CDH11-202ENST00000394156 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
CDH11-202ENST00000394156 FUT5Q11128 374 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 TMEM200AQ86VY9 491 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 SLC35G3Q8N808 338 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 NKAIN3Q8N8D7 197 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 BCO1Q9HAY6 547 aa8.09□□□□□ -1.11
CDH11-202ENST00000394156 PRMT8Q9NR22 394 aaPredicted RBP8.09□□□□□ -1.11
CDH11-202ENST00000394156 OR6C6A6NF89 314 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 ZNF354AO60765 605 aaPredicted RBP8.09□□□□□ -1.12
CDH11-202ENST00000394156 SNCAP37840 140 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 C19orf57Q0VDD7 668 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 NSUN5P2Q63ZY6 315 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 CDH26Q8IXH8 852 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 NPEPL1Q8NDH3 523 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 TMED6Q8WW62 240 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.12
CDH11-202ENST00000394156 OPN3Q9H1Y3 402 aaPredicted RBP8.09□□□□□ -1.12
CDH11-202ENST00000394156 ELF5Q9UKW6 265 aaPredicted RBP8.09□□□□□ -1.12
CDH11-202ENST00000394156 OSGIN2Q9Y236 505 aa8.09□□□□□ -1.12
CDH11-202ENST00000394156 A0A1W2PPH5 198 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 CCR9P51686 369 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 MZT1Q08AG7 82 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 KIAA0141Q14154 515 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 HIST2H3PS2Q5TEC6 136 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SLC16A12Q6ZSM3 486 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 FOXJ3Q9UPW0 622 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SIP14410 1827 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SERTM1A2A2V5 107 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 ZNF705GA8MUZ8 300 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 DCTN6O00399 190 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 IFNA1P01562 189 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 PPP3CBP16298 524 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 LTBRP36941 435 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 IL10RAQ13651 578 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 B3GAT1Q9P2W7 334 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 HDGFL3Q9Y3E1 203 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 GMDSO60547 372 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 HTD2P86397 168 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 ST3GAL2Q16842 350 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 LILRB4Q8NHJ6 448 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 RNF128Q8TEB7 428 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SPIN2AQ99865 258 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SPIN2BQ9BPZ2 258 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 ZNF768Q9H5H4 540 aaKnown RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 SLC39A9Q9NUM3 307 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 OR5V1Q9UGF6 321 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 XRCC3O43542 346 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 LANCL1O43813 399 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 LIMS3P0CW19 117 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 LIMS4P0CW20 117 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 TMEM88Q6PEY1 159 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 WDR74Q6RFH5 385 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 KMT5CQ86Y97 462 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 MFSD4AQ8N468 514 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SARAFQ96BY9 339 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 EXOSC3Q9NQT5 275 aaKnown RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 CES1P1Q9UKY3 287 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 IGKV3-7A0A075B6H7 116 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 GEMIN2O14893 280 aaKnown RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 SIGLEC5O15389 551 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 EFNB2P52799 333 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 ZNF169Q14929 603 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 STPG1Q5TH74 334 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 C4orf45Q96LM5 186 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 FGF20Q9NP95 211 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 QPCTLQ9NXS2 382 aa8.08□□□□□ -1.12
CDH11-202ENST00000394156 RCL1Q9Y2P8 373 aaKnown RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 SIRT4Q9Y6E7 314 aaPredicted RBP8.08□□□□□ -1.12
CDH11-202ENST00000394156 RPS10-NUDT3A0A1W2PQS6 291 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH11-202ENST00000394156 WISP3O95389 354 aaPredicted RBP8.07□□□□□ -1.12
CDH11-202ENST00000394156 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
CDH11-202ENST00000394156 PPP1CBP62140 327 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 SKP2Q13309 424 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 D2HGDHQ8N465 521 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 OR4D10Q8NGI6 311 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 MRPS24Q96EL2 167 aaKnown RBP8.07□□□□□ -1.12
CDH11-202ENST00000394156 OR8B4Q96RC9 309 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 MRI1Q9BV20 369 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 SLC25A32Q9H2D1 315 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 CLEC5AQ9NY25 188 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 LIFP15018 202 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 ZNF133P52736 654 aaPredicted RBP8.07□□□□□ -1.12
CDH11-202ENST00000394156 PXT1Q8NFP0 134 aa8.07□□□□□ -1.12
CDH11-202ENST00000394156 SLC25A31Q9H0C2 315 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms