RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 TCEAL3Q969E4 200 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 REEP6Q96HR9 211 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ALKBH3Q96Q83 286 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CDC6Q99741 560 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 METTL9Q9H1A3 318 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ELL3Q9HB65 397 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PCDHB16Q9NRJ7 776 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF224Q9NZL3 707 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PFDN2Q9UHV9 154 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TIMM10BQ9Y5J6 103 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 MYO15AQ9UKN7 3530 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 LOC100509620A0A075B734 347 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 LNP1A1A4G5 178 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 OR5H14A6NHG9 310 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 OR2AT4A6NND4 320 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 I3L521 148 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 M0R296 226 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 XRCC2O43543 280 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 SYNGR4O95473 234 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
SMAD1-202ENST00000394092 CSTBP04080 98 aaKnown RBP6.29□□□□□ -1.4
SMAD1-202ENST00000394092 LCATP04180 440 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 B4GALT1P15291 398 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF32P17041 273 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 AKR1C4P17516 323 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 DLSTP36957 453 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 RGS19P49795 217 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 GFRA1P56159 465 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM50BP56557 158 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 UBE2V2Q15819 145 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 CEACAM16Q2WEN9 425 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 SNAI3Q3KNW1 292 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 PLEKHN1Q494U1 663 aaPredicted RBP6.29□□□□□ -1.4
SMAD1-202ENST00000394092 CHRFAM7AQ494W8 412 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 C11orf87Q6NUJ2 197 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 C17orf107Q6ZR85 190 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM185AQ8NFB2 350 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 OR5D18Q8NGL1 313 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 COQ8AQ8NI60 647 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 THAP6Q8TBB0 222 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 MARCH1Q8TCQ1 289 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 NPRL2Q8WTW4 380 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 ST8SIA4Q92187 359 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 PIGTQ969N2 578 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 BORCS8Q96FH0 119 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 PECRQ9BY49 303 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 LINC00470Q9BZP3 86 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 PPA2Q9H2U2 334 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 GPR35Q9HC97 309 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 PARPBPQ9NWS1 579 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 EDARQ9UNE0 448 aa6.29□□□□□ -1.4
SMAD1-202ENST00000394092 IGKV3D-15A0A087WSY6 115 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 TRAV14DV4A0A0A6YYC5 116 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 A0A1W2PP11 408 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 hCG_1807616A0A1W2PRN6 198 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 FOXI3A8MTJ6 420 aaPredicted RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 C9orf172C9J069 976 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 E9PLN8 166 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 SHOXO15266 292 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 EFSO43281 561 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 BCL2L11O43521 198 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 PDGFAP04085 211 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 HPNP05981 417 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 DBHP09172 617 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 RFPL3SP0C7P2 107 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM225BP0DP42 221 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 ANOS1P23352 680 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 MPGP29372 298 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 RBP2P50120 134 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 ATP1B3P54709 279 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 SNU13P55769 128 aaKnown RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 MTCP1P56278 107 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 CLDN15P56746 228 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 FOXO1Q12778 655 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 RSU1Q15404 277 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 AANATQ16613 207 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 RSPO1Q2MKA7 263 aaPredicted RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 KRTAP27-1Q3LI81 207 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 CDCP2Q5VXM1 449 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF774Q6NX45 483 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 PEG10Q86TG7 708 aaKnown RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 KCNRGQ8N5I3 272 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 INO80EQ8NBZ0 244 aaPredicted RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 OR2M7Q8NG81 312 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 OR5AP2Q8NGF4 316 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 CASTOR1Q8WTX7 329 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 ROBO4Q8WZ75 1007 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 PSMF1Q92530 271 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 MRGPRFQ96AM1 343 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 SGK3Q96BR1 496 aa6.28□□□□□ -1.4
SMAD1-202ENST00000394092 WDR89Q96FK6 387 aaPredicted RBP6.28□□□□□ -1.4
SMAD1-202ENST00000394092 Q96M66 194 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms