RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 KMT2EQ8IZD2 1858 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 FXYD6-FXYD2A0A087WZ82 144 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 MMP7P09237 267 aaPredicted RBP22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 IKZF1Q13422 519 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 SPSB1Q96BD6 273 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 PECRQ9BY49 303 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 FXYD6Q9H0Q3 95 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 SLC7A10Q9NS82 523 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 MED13Q9UHV7 2174 aa22.29■■□□□ 1.16
SMARCD3-203ENST00000392811 ACTBL2Q562R1 376 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 VAX1Q5SQQ9 334 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 HOGA1Q86XE5 327 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 ADAD2Q8NCV1 583 aaKnown RBP22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 FER1L6-AS2Q96M78 137 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 UBQLN2Q9UHD9 624 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 FARS2O95363 451 aaKnown RBP22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 SYNGR4O95473 234 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 IL2RAP01589 272 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 CBX5P45973 191 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 SORDQ00796 357 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 GK2Q14410 553 aaPredicted RBP22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 TUSC5Q8IXB3 177 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 OR5M8Q8NGP6 311 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 ST8SIA4Q92187 359 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 LINC00470Q9BZP3 86 aa22.28■■□□□ 1.16
SMARCD3-203ENST00000392811 FAM230AA0A1W2PPH8 454 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 C9orf170A2RU37 121 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 SP1P08047 785 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 TMEM225BP0DP42 221 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 CPT2P23786 658 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 TRIP6Q15654 476 aaKnown RBP22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 PABPC1L2AQ5JQF8 200 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 MARCH1Q8TCQ1 289 aa22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 ZNF230Q9UIE0 474 aaPredicted RBP22.27■■□□□ 1.16
SMARCD3-203ENST00000392811 PPP3CBP16298 524 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 MEOX1P50221 254 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ARF1P84077 181 aaKnown RBP22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 NRN1LQ496H8 165 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ATP1A1-AS1Q5TC04 95 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 FAHD2BQ6P2I3 314 aaPredicted RBP22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 MDS2Q8NDY4 140 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 TERB2Q8NHR7 220 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 FNDC9Q8TBE3 224 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 FAHD2AQ96GK7 314 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 CALHM2Q9HA72 323 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 KCNN3Q9UGI6 736 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ZNF391Q9UJN7 358 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 IGKV1-27A0A075B6S5 117 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 OR6C65A6NJZ3 312 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 EFSO43281 561 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 NME2P1O60361 137 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ZNF24P17028 368 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 AMY2BP19961 511 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 NME2P22392 152 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 GMFBP60983 142 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ZNF92Q03936 586 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 CNN3Q15417 329 aaKnown RBP22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ARRDC1Q8N5I2 433 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 ST6GALNAC5Q9BVH7 336 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 RGCCQ9H4X1 137 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 PARPBPQ9NWS1 579 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 MCTS1Q9ULC4 181 aaKnown RBP22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 KLF13Q9Y2Y9 288 aaPredicted RBP22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 MAB21L2Q9Y586 359 aa22.26■■□□□ 1.15
SMARCD3-203ENST00000392811 hCG_38984A0A1B0GV85 526 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 RPS10-NUDT3A0A1W2PQS6 291 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 LINC00862A6NCI5 91 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 AKR1C4P17516 323 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 PRKACBP22694 351 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 S100A11P31949 105 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 IL13RA1P78552 427 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 FAM3AP98173 230 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 C9orf135Q5VTT2 229 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 TMEM42Q69YG0 159 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 TMUB2Q71RG4 321 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 CPEB3Q8NE35 698 aaKnown RBP22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 OR5H2Q8NGV7 314 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 MITD1Q8WV92 249 aa22.25■■□□□ 1.15
SMARCD3-203ENST00000392811 TRAV14DV4A0A0A6YYC5 116 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 ANGPTL7O43827 346 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 OR3A3P47888 321 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 LIN54Q6MZP7 749 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 LPCAT3Q6P1A2 487 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 Q96M66 194 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 RFPL4AA6NLU0 287 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 SERPINE3A8MV23 424 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 LEUTXA8MZ59 168 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 RFPL4AL1F8VTS6 287 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 CCSO14618 274 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 SPRY1O43609 319 aaPredicted RBP22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 NRASP01111 189 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 GABRR1P24046 479 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 SRSF4Q08170 494 aaKnown RBP22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 HLXQ14774 488 aaPredicted RBP22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 ZNF100Q8IYN0 542 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 METTL9Q9H1A3 318 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 PCNX2A6NKB5 2137 aa22.24■■□□□ 1.15
SMARCD3-203ENST00000392811 PLATP00750 562 aa22.23■■□□□ 1.15
SMARCD3-203ENST00000392811 CD8AP01732 235 aa22.23■■□□□ 1.15
SMARCD3-203ENST00000392811 EDN3P14138 238 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms