RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 WISP3O95389 354 aaPredicted RBP1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 IGKV3-11P04433 115 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 LINC00869P0C866 280 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 PRKACBP22694 351 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 NPY1RP25929 384 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 GPR4P46093 362 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 TSPAN5P62079 268 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 PPP1CAP62136 330 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 FBXL19-AS1Q494R0 122 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 CDNFQ49AH0 187 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 C6orf99Q4VX62 202 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 TTC32Q5I0X7 151 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 TMEM236Q5W0B7 351 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 APOBEC3HQ6NTF7 200 aaKnown RBP1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 SSX6Q7RTT6 188 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 OR4M2Q8NGB6 313 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 OR13G1Q8NGZ3 307 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 DOK4Q8TEW6 326 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 C17orf50Q8WW18 174 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 L3HYPDHQ96EM0 354 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 OR10C1Q96KK4 312 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 VAT1Q99536 393 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 TIMM29Q9BSF4 260 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 HINT2Q9BX68 163 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 TSGA10Q9BZW7 698 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 GOLPH3Q9H4A6 298 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 RBFOX1Q9NWB1 397 aaKnown RBP1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 STMN3Q9NZ72 180 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 VAX2Q9UIW0 290 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 RAB23Q9ULC3 237 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 SIGLEC7Q9Y286 467 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 CBY1Q9Y3M2 126 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 PLA2R1Q13018 1463 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 GTF3C1Q12789 2109 aa1.81□□□□□ -2.12
TRAJ40-201ENST00000390497 MTCL1Q9Y4B5 1905 aaKnown RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TRAV8-7A0A075B6U6 113 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 IGHV3-49A0A0A0MS15 119 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TRAV40A0A0B4J280 105 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 C5orf63A6NC05 138 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TMEM150BA6NC51 233 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 A8MWL6 223 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 HSBP1L1C9JCN9 74 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 J3QT63 122 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 RNF113AO15541 343 aaKnown RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 SERPINB7O75635 380 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 CYB5R3P00387 301 aaPredicted RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 HLA-DQB1P01920 261 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 IL4P05112 153 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 CCL2P13500 99 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 AZU1P20160 251 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 P2RY2P41231 377 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 HTR2BP41595 481 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 PRLHRP49683 370 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 ZNF816Q0VGE8 651 aaPredicted RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 DYNC1I2Q13409 638 aaKnown RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 EIF4EBP1Q13541 118 aaPredicted RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 EBI3Q14213 229 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 MAD2L1BPQ15013 274 aaPredicted RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 COX19Q49B96 90 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 IDNKQ5T6J7 187 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 SAXO2Q658L1 398 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 FAHD1Q6P587 224 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 SHISA6Q6ZSJ9 500 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 Q6ZVH6 145 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 NELFCDQ8IXH7 590 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TCAIMQ8N3R3 496 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 OR5M1Q8NGP8 315 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 OR51Q1Q8NH59 317 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 NT5CQ8TCD5 201 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TMEM239Q8WW34 195 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 GHSRQ92847 366 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TMEM159Q96B96 161 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 LINC00477Q96M19 166 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 C18orf15Q96N68 181 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 RNF5Q99942 180 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TMED9Q9BVK6 235 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TBL1XR1Q9BZK7 514 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 OR52A5Q9H2C5 316 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 METTL8Q9H825 291 aaKnown RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 NECAP2Q9NVZ3 263 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 USP42Q9H9J4 1324 aaKnown RBP1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 PIK3R4Q99570 1358 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 TNS2Q63HR2 1409 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 SLIT3O75094 1523 aa1.8□□□□□ -2.12
TRAJ40-201ENST00000390497 ZNFX1Q9P2E3 1918 aaKnown RBP1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 SLC5A10A0PJK1 596 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 C7orf66A4D0T2 115 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 TVP23AA6NH52 213 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 ZNF850A8MQ14 1090 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 M0R1B8 84 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 CRXO43186 299 aaPredicted RBP1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 NDUFS5O43920 106 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 SC5DO75845 299 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 RCBTB2O95199 551 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 CST4P01036 141 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 MAS1P04201 325 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 RPN2P04844 631 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 OR4Q2P0C623 313 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 GIMD1P0DJR0 217 aa1.79□□□□□ -2.12
TRAJ40-201ENST00000390497 LIPCP11150 499 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms