RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TIMM8BQ9Y5J9 83 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 HS3ST3A1Q9Y663 406 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 NSG1A0A0A6YYJ2 146 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 RBP2P50120 134 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 LBX1P52954 281 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 TSPO2Q5TGU0 170 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR8G2PQ6IF36 304 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF321PQ8N8H1 164 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.53
TRAPPC9-201ENST00000389328 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 A0A1W2PPC1 479 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 PPP5D1E7EU14 171 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 CDC14BO60729 498 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 MSR1P21757 451 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 CATSPERDQ86XM0 798 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 RPS4Y2Q8TD47 263 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 LIPHQ8WWY8 451 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 REEP6Q96HR9 211 aa11.71□□□□□ -0.54
TRAPPC9-201ENST00000389328 SERPINE3A8MV23 424 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 H0YIG0 161 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 CLDN1O95832 211 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 FOSL1P15407 271 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 AADACP22760 399 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 SULT1A1P50225 295 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 PRSS12P56730 875 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 AKR7LQ8NHP1 331 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 RLFQ13129 1914 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 LOC102725191A0A1B0GVB3 256 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR2J2O76002 312 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 GDF15Q99988 308 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 MPTX1A8MV57 137 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 H7BYZ3 331 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 EIF3GO75821 320 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 RAC2P15153 192 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZBTB25P24278 435 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 CAPZBP47756 277 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 C8orf44Q96CB5 159 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 GNPNAT1Q96EK6 184 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 KCNIP1Q9NZI2 227 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR14J1Q9UGF5 321 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 PLPP3O14495 311 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 SYNGR4O95473 234 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 IGHV3-9P01782 118 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 ID4P47928 161 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 LINC01590Q5TEZ4 76 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 TVP23CQ96ET8 276 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 FAAP24Q9BTP7 215 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 FOXQ1Q9C009 403 aa11.7□□□□□ -0.54
TRAPPC9-201ENST00000389328 A0A1B0GX78 115 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF217O75362 1048 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 DFFBO76075 338 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 HBG1P69891 147 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 HBG2P69892 147 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF100Q8IYN0 542 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 COMMD1Q8N668 190 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 EDEM2Q9BV94 578 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 IGHV3-15A0A0B4J1V0 119 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 CDRT15L2A8MXV6 281 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 LMX1BO60663 402 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 RPS2P15880 293 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 C17orf78Q8N4C9 275 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 ADAT3Q96EY9 351 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 DOCK4Q8N1I0 1966 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 MFNGO00587 321 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 EFSO43281 561 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 SCRG1O75711 98 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 YIF1AO95070 293 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR5AC1P0C628 307 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 OTX2P32243 289 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 TLE1Q04724 770 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF528Q3MIS6 628 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 DEGS2Q6QHC5 323 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR8U1Q8NH10 309 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 SLC25A28Q96A46 364 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 LMAN1LQ9HAT1 526 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 PTRH2Q9Y3E5 179 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-201ENST00000389328 GJE1A6NN92 205 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 SKP2Q13309 424 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms