RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 TCF20Q9UGU0 1960 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 IGKV3D-11A0A0A0MRZ8 115 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 MASP2O00187 686 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 SSX5O60225 188 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TERB2Q8NHR7 220 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 SLAMF9Q96A28 289 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 PRMT8Q9NR22 394 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 KLHDC2Q9Y2U9 406 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TRAV8-7A0A075B6U6 113 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 C17orf51A8MQB3 221 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 F8W036 122 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TNFSF12O43508 249 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 HIST1H1DP16402 221 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 SDHBP21912 280 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 OR3A4PP47883 348 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 MRPS34P82930 218 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 APCDD1LQ8NCL9 501 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 OR4D6Q8NGJ1 314 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 OR51A4Q8NGJ6 313 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TTTY12Q9BZ98 90 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 AKIRIN1Q9H9L7 192 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 ST6GALNAC2Q9UJ37 374 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 PYCARD-AS1I3L0S3 204 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 CST2P09228 141 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF83P51522 516 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF574Q6ZN55 896 aaPredicted RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 RFLNBQ8N5W9 214 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ASB5Q8WWX0 329 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 EXTL1Q92935 676 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 TRMT61AQ96FX7 289 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ARPC5LQ9BPX5 153 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 MIXL1Q9H2W2 232 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 LRP5LA4QPB2 252 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 H7C2Y5 167 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 CA6P23280 308 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 SERPINF1P36955 418 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 F2RL1P55085 397 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 NANOS3P60323 173 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 PRDX4Q13162 271 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 PDCD1Q15116 288 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 SFRP5Q5T4F7 317 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 CPEB3Q8NE35 698 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ADAT1Q9BUB4 502 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 CCDC86Q9H6F5 360 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 UNKLQ9H9P5 680 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 GPR35Q9HC97 309 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 NEUROG3Q9Y4Z2 214 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 UPRTQ96BW1 309 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 ZC3H10Q96K80 434 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 GLRX2Q9NS18 164 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
GABPB1-203ENST00000380877 GFOD1Q9NXC2 390 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 CLDN1O95832 211 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 IFNA4P05014 189 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 RAB6AP20340 208 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 HOXA6P31267 233 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 RHEBQ15382 184 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
GABPB1-203ENST00000380877 LUMP51884 338 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-203ENST00000380877 SNRPNP63162 240 aaKnown RBP10.82□□□□□ -0.68
GABPB1-203ENST00000380877 SMIM21Q3B7S5 101 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 SHEQ5VZ18 495 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 LILRB4Q8NHJ6 448 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 CNTNAP3BQ96NU0 1288 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 KCNK15Q9H427 330 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM38BQ9NVV0 291 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 IL17BQ9UHF5 180 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 COL4A6Q14031 1691 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 NPIPB9F8W1W9 429 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 NKX2-8O15522 239 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 TMIGD3P0DMS9 266 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-203ENST00000380877 SNCAP37840 140 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 GZMKP49863 264 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM251Q8N6I4 163 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM105Q8N8V8 129 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 TCTEX1D2Q8WW35 142 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 NDUFB6O95139 128 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 THY1P04216 161 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 GABRA1P14867 456 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 CLINT1Q14677 625 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 C20orf196Q8IYI0 205 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 C1orf87Q8N0U7 546 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 RTN4IP1Q8WWV3 396 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-203ENST00000380877 YIPF5Q969M3 257 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 V9GYH0 126 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 MED6O75586 246 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 RECKO95980 971 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 ACP1P24666 158 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 PTAFRP25105 342 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 ADPRHL1Q8NDY3 354 aa10.82□□□□□ -0.68
GABPB1-203ENST00000380877 PTPRDP23468 1912 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 IGF2P01344 180 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms