RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MFNGO00587 321 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF205O95201 554 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 SPP1P10451 314 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 TBPP20226 339 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 AKR1C3P42330 323 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF528Q3MIS6 628 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 DEFB123Q8N688 67 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 RHOFQ9HBH0 211 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 EHFQ9NZC4 300 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 CARHSP1Q9Y2V2 147 aaKnown RBP14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 IGKV1D-8A0A087WSZ0 117 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 FBXO24O75426 580 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 C10orf91Q5T1B1 145 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CLEC9AQ6UXN8 241 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 OR2AJ1Q8NGZ0 328 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF160Q9HCG1 818 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PGA4P0DJD7 388 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PGA3P0DJD8 388 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RPS2P15880 293 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF43P17038 809 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 OTX2P32243 289 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RAB13P51153 203 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 P2RY4P51582 365 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 SNU13P55769 128 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CSNK2A1P68400 391 aaPredicted RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 VAX1Q5SQQ9 334 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 DHRS7BQ6IAN0 325 aaPredicted RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 C5orf46Q6UWT4 87 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RAB11FIP2Q7L804 512 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 SPAG16Q8N0X2 631 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CSNK2A3Q8NEV1 391 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 KCNG3Q8TAE7 436 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RXFP4Q8TDU9 374 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 NAT6Q93015 286 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 C12orf57Q99622 126 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 SLC5A7Q9GZV3 580 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 ALKBH4Q9NXW9 302 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PLA2G2EQ9NZK7 142 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 EXPH5Q8NEV8 1989 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF726A6NNF4 738 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CRYBA1P05813 215 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CLDN17P56750 224 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 NAAAQ02083 359 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PNLIPRP3Q17RR3 467 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 NOXO1Q8NFA2 376 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 OR51T1Q8NGJ9 327 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 NRIP2Q9BQI9 281 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 SLC26A1Q9H2B4 701 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 RAB18Q9NP72 206 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 EML6Q6ZMW3 1958 aa14.28□□□□□ -0.12
NKX3-1-201ENST00000380871 CHRM2P08172 466 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 CCL3P10147 92 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 SERPINA2P20848 420 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 PTGDSP41222 190 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 OR3A2P47893 321 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 GABREP78334 506 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 CYCSP99999 105 aaKnown RBP14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF385CQ66K41 422 aaPredicted RBP14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 ARRDC1Q8N5I2 433 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 WDSUB1Q8N9V3 476 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 HDHD3Q9BSH5 251 aaPredicted RBP14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 SMIM3Q9BZL3 60 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 FBLN5Q9UBX5 448 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 ANAPC10Q9UM13 185 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 B3GALT5Q9Y2C3 310 aa14.27□□□□□ -0.12
NKX3-1-201ENST00000380871 MEX3AA1L020 520 aaKnown RBP14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 TOX3O15405 576 aaPredicted RBP14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 MED6O75586 246 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 HPNP05981 417 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 PRSS12P56730 875 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 GPR85P60893 370 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 LRRC18Q8N456 261 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF283Q8N7M2 679 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 POC1AQ8NBT0 407 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 OR2M3Q8NG83 312 aa14.27□□□□□ -0.13
NKX3-1-201ENST00000380871 TRAF3IP2O43734 574 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 CSTBP04080 98 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 FPR2P25090 351 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 PDZK1IP1Q13113 114 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 CDCP2Q5VXM1 449 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 PEG10Q86TG7 708 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 AGBL5Q8NDL9 886 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 ADAMTS17Q8TE56 1095 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 CDC6Q99741 560 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF701Q9NV72 531 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 RCC2Q9P258 522 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 SCGNO76038 276 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 QDPRP09417 244 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 GSK3AP49840 483 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 LHFPL1Q86WI0 220 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 AQP10Q96PS8 301 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF581Q9P0T4 197 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms