RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LHFPL2Q6ZUX7 228 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 C12orf45Q8N5I9 185 aaPredicted RBP20.13■□□□□ 0.81
VPS16-201ENST00000380443 UXS1Q8NBZ7 420 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 C1QTNF5Q9BXJ0 243 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 GP6Q9HCN6 339 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 AHCTF1Q8WYP5 2266 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 PER3P56645 1201 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 TMPRSS7Q7RTY8 843 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 SLC25A42Q86VD7 318 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 ARRDC1Q8N5I2 433 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 OR4K15Q8NH41 348 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 SNAPC3Q92966 411 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 SPSB4Q96A44 273 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 CHIAQ9BZP6 476 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 SLC7A10Q9NS82 523 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 F5H5P2 479 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 MTCP1P56278 107 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 TSPAN5P62079 268 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 ARF1P84077 181 aaKnown RBP20.12■□□□□ 0.81
VPS16-201ENST00000380443 LPCAT3Q6P1A2 487 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 IGF2-ASQ6U949 168 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 DPPA2Q7Z7J5 298 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 MCEMP1Q8IX19 187 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 TUSC5Q8IXB3 177 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 GVQW1Q8N7I0 195 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 CHST6Q9GZX3 395 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 METTL9Q9H1A3 318 aa20.12■□□□□ 0.81
VPS16-201ENST00000380443 MED19A0JLT2 244 aaPredicted RBP20.11■□□□□ 0.81
VPS16-201ENST00000380443 HMSDA8MTL9 139 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 HRH1P35367 487 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 IKZF1Q13422 519 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ASCL4Q6XD76 172 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.11■□□□□ 0.81
VPS16-201ENST00000380443 CD163Q86VB7 1156 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 APH1AQ96BI3 265 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ARHGAP5-AS1Q96IT6 56 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 SCGB3A2Q96PL1 93 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 CLEC4MQ9H2X3 399 aaPredicted RBP20.11■□□□□ 0.81
VPS16-201ENST00000380443 PCDHB16Q9NRJ7 776 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 OPN4Q9UHM6 478 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 CACNA1AO00555 2505 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ARGFXA6NJG6 315 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ACKR3P25106 362 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 HGFACQ04756 655 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 OR8B8Q15620 311 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 ZNF766Q5HY98 468 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 PABPC1L2AQ5JQF8 200 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 COLCA1Q6ZS62 124 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 FTMTQ8N4E7 242 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 POM121Q96HA1 1249 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 GPR173Q9NS66 373 aa20.11■□□□□ 0.81
VPS16-201ENST00000380443 hCG_38984A0A1B0GV85 526 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 PLSCR5A0PG75 271 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 ARR3P36575 388 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 RBP2P50120 134 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 FUT6P51993 359 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 TAS2R31P59538 309 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 GMFBP60983 142 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 UBE2MP61081 183 aaKnown RBP20.1■□□□□ 0.81
VPS16-201ENST00000380443 ARG2P78540 354 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 ARFRP1Q13795 201 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 C1QL2Q7Z5L3 287 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 TMED4Q7Z7H5 227 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 HOGA1Q86XE5 327 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 OR2AE1Q8NHA4 323 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 FGFBP3Q8TAT2 258 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 FNDC9Q8TBE3 224 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 NPRL2Q8WTW4 380 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 PIGTQ969N2 578 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 SCNM1Q9BWG6 230 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 CALHM2Q9HA72 323 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 SLC23A1Q9UHI7 598 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 SLC7A11Q9UPY5 501 aa20.1■□□□□ 0.81
VPS16-201ENST00000380443 A0A1W2PP11 408 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 SLC22A5O76082 557 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 NRASP01111 189 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 PATE4P0C8F1 98 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 BLVRBP30043 206 aaPredicted RBP20.09■□□□□ 0.81
VPS16-201ENST00000380443 FAM3AP98173 230 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 NKPD1Q17RQ9 610 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 OR52W1Q6IF63 320 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 TEX261Q6UWH6 196 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 OR8H1Q8NGG4 311 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 ST8SIA4Q92187 359 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 MRPS24Q96EL2 167 aaKnown RBP20.09■□□□□ 0.81
VPS16-201ENST00000380443 BORCS8Q96FH0 119 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 WASF3Q9UPY6 502 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 VSIG4Q9Y279 399 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 U3KQ87 197 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 ZNF816-ZNF321PA0A0X1KG74 233 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 CEACAM18A8MTB9 384 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 GOSR2O14653 212 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 IL2RAP01589 272 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 LIPCP11150 499 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 ZNF81P51508 661 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 ATP1B3P54709 279 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 TAS2R46P59540 309 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 PLXDC2Q6UX71 529 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.09■□□□□ 0.81
VPS16-201ENST00000380443 TMEM17Q86X19 198 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms