RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 FARS2O95363 451 aaKnown RBP16.95■□□□□ 0.3
SSU72-204ENST00000378726 RAB3AP20336 220 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 PCBD1P61457 104 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 ARF1P84077 181 aaKnown RBP16.95■□□□□ 0.3
SSU72-204ENST00000378726 SORDQ00796 357 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 ECH1Q13011 328 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 C4orf46Q504U0 113 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 NUFIP2Q7Z417 695 aaKnown RBP16.95■□□□□ 0.3
SSU72-204ENST00000378726 OR13C9Q8NGT0 318 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 APH1AQ96BI3 265 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 UPB1Q9UBR1 384 aa16.95■□□□□ 0.3
SSU72-204ENST00000378726 IGHG3P01860 377 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 CRYGSP22914 178 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 PRSS3P35030 304 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 C1orf100Q5SVJ3 147 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 C9orf135Q5VTT2 229 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 LYPD6Q86Y78 171 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 OR52N4Q8NGI2 321 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 OR1S1Q8NH92 325 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 LYZL4Q96KX0 146 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 LAMA5O15230 3695 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 A0A0U1RQV5 110 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 LOC390937A0A1W2PQ73 354 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 ZNF587BE7ETH6 402 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 RPL36A-HNRNPH2H7BZ11 118 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 WISP2O76076 250 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 FGF2P09038 288 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 NRN1LQ496H8 165 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 STEAP1BQ6NZ63 245 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 ZNF529Q6P280 563 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 C11orf88Q6PI97 169 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 ZNF100Q8IYN0 542 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 ZADH2Q8N4Q0 377 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 BVESQ8NE79 360 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 OR14K1Q8NGZ2 314 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 OR2H1Q9GZK4 316 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 ATG5Q9H1Y0 275 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 POFUT1Q9H488 388 aa16.94■□□□□ 0.3
SSU72-204ENST00000378726 SLC22A20A6NK97 555 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 KRBOX1C9JBD0 128 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 IGLV3-1P01715 115 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 SPINK2P20155 84 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 RSPO4Q2I0M5 234 aaPredicted RBP16.93■□□□□ 0.3
SSU72-204ENST00000378726 DRAM2Q6UX65 266 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 CDH26Q8IXH8 852 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 WNT5BQ9H1J7 359 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 GLS2Q9UI32 602 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 OR6C6A6NF89 314 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 FOXG1P55316 489 aaPredicted RBP16.93■□□□□ 0.3
SSU72-204ENST00000378726 FOXC1Q12948 553 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 PGAP1Q75T13 922 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 OR4D6Q8NGJ1 314 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 GAL3ST1Q99999 423 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 MFFQ9GZY8 342 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 CNTD2Q9H8S5 307 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 GPR160Q9UJ42 338 aa16.93■□□□□ 0.3
SSU72-204ENST00000378726 TRAV14DV4A0A0A6YYC5 116 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 SPDEFO95238 335 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 HTR5AP47898 357 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 GMFBP60983 142 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 MPPED2Q15777 294 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 OR52H1Q8NGJ2 320 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 GPX8Q8TED1 209 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 SGK3Q96BR1 496 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 OR10A2Q9H208 303 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 FREM1Q5H8C1 2179 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 SPTBN2O15020 2390 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 A0A096LPE4 126 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 A0A1W2PPZ6 126 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 RLN2P04090 185 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 MMP7P09237 267 aaPredicted RBP16.92■□□□□ 0.3
SSU72-204ENST00000378726 MPGP29372 298 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 NHLH1Q02575 133 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 STK11Q15831 433 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 SNAI3Q3KNW1 292 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 TFAP2EQ6VUC0 442 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 PDZD9Q8IXQ8 264 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 MYEF2Q9P2K5 600 aaKnown RBP16.92■□□□□ 0.3
SSU72-204ENST00000378726 ZNF230Q9UIE0 474 aaPredicted RBP16.92■□□□□ 0.3
SSU72-204ENST00000378726 RHBDD3Q9Y3P4 386 aa16.92■□□□□ 0.3
SSU72-204ENST00000378726 PRRC2CQ9Y520 2896 aaKnown RBP16.91■□□□□ 0.3
SSU72-204ENST00000378726 ZNHIT1O43257 154 aa16.91■□□□□ 0.3
SSU72-204ENST00000378726 ERCC1P07992 297 aaPredicted RBP16.91■□□□□ 0.3
SSU72-204ENST00000378726 RELL2Q8NC24 303 aaPredicted RBP16.91■□□□□ 0.3
SSU72-204ENST00000378726 OR6K3Q8NGY3 331 aa16.91■□□□□ 0.3
SSU72-204ENST00000378726 PRDM14Q9GZV8 571 aa16.91■□□□□ 0.3
SSU72-204ENST00000378726 C12orf49Q9H741 205 aa16.91■□□□□ 0.3
SSU72-204ENST00000378726 ZNF175Q9Y473 711 aa16.91■□□□□ 0.3
SSU72-204ENST00000378726 RFPL4AA6NLU0 287 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 RFPL4AL1F8VTS6 287 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 M0QYG6 137 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 MTRF1O75570 445 aaKnown RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 DHRS3O75911 302 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 LCATP04180 440 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 RPA2P15927 270 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 PRKACAP17612 351 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 HGFACQ04756 655 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 LY6G6FQ5SQ64 297 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms