RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 IRF3Q14653 427 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 CEP78Q5JTW2 689 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 AVPI1Q5T686 147 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 KCTD8Q6ZWB6 473 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 UTS2BQ765I0 119 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PRSS48Q7RTY5 328 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 LRRC28Q86X40 367 aaPredicted RBP11.14□□□□□ -0.63
CKAP2-202ENST00000378034 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 MAPK1IP1LQ8NDC0 245 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PDCD1LG2Q9BQ51 273 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 UBAP1Q9NZ09 502 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 ERVK-18Q9QC07 812 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 MED13LQ71F56 2210 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 F8P00451 2351 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PPIAL4EA0A075B759 164 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF732B4DXR9 585 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PPIAL4DF5H284 164 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 MRPS14O60783 128 aaKnown RBP11.14□□□□□ -0.63
CKAP2-202ENST00000378034 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
CKAP2-202ENST00000378034 CD1AP06126 327 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PPIAL4FP0DN26 164 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 GZMKP49863 264 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 GPM6AP51674 278 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 DMKNQ6E0U4 476 aaPredicted RBP11.14□□□□□ -0.63
CKAP2-202ENST00000378034 XAF1Q6GPH4 301 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 SPICQ8N5J4 248 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 OR10Z1Q8NGY1 313 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 OR51I2Q9H344 312 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 GPR173Q9NS66 373 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 PPIAL4AQ9Y536 164 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 LALBAP00709 142 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 LHBP01229 141 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 CNN3Q15417 329 aaKnown RBP11.13□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF573Q86YE8 665 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 OR10AC1Q8NH08 325 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 FGGYQ96C11 551 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 RAB39BQ96DA2 213 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
CKAP2-202ENST00000378034 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
CKAP2-202ENST00000378034 DHDHQ9UQ10 334 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF281Q9Y2X9 895 aa11.13□□□□□ -0.63
CKAP2-202ENST00000378034 YLPM1P49750 1951 aaKnown RBP11.13□□□□□ -0.63
CKAP2-202ENST00000378034 hCG_1807616A0A1W2PRN6 198 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 PQLC2LA1A4F0 135 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ISPDA4D126 451 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 A6NIN4 97 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 H3BSH0 61 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 PLPP2O43688 288 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 LMX1BO60663 402 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 FUT6P51993 359 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 LMO4P61968 165 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ZMYND11Q15326 602 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 SPHARQ15513 63 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 UBE2V2Q15819 145 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 CYB5R2Q6BCY4 276 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 WDR82Q6UXN9 313 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 SCCPDHQ8NBX0 429 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 DNAAF1Q8NEP3 725 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 OR51A4Q8NGJ6 313 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 GAL3ST1Q99999 423 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 NEK6Q9HC98 313 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 SIRT4Q9Y6E7 314 aaPredicted RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF469Q96JG9 3925 aaPredicted RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 CDIPTO14735 213 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 WNT9BO14905 357 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ALX3O95076 343 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 MT-ND2P03891 347 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 CD2P06729 351 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 PRKACBP22694 351 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 EEF1B2P24534 225 aaKnown RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 YIF1BQ5BJH7 314 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF826PQ6ZT77 177 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 SERPINA12Q8IW75 414 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 PARP16Q8N5Y8 322 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 GCSAMQ8N6F7 178 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 OR5D14Q8NGL3 314 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF671Q8TAW3 534 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 TSEN15Q8WW01 171 aaKnown RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 SGCDQ92629 289 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 GHSRQ92847 366 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
CKAP2-202ENST00000378034 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF665Q9H7R5 613 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 TMEM165Q9HC07 324 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ISYNA1Q9NPH2 558 aa11.12□□□□□ -0.63
CKAP2-202ENST00000378034 ACANP16112 2415 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms