RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 HIST1H2AAQ96QV6 131 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 TEAD3Q99594 435 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 SNTG1Q9NSN8 517 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 TVP23BQ9NYZ1 205 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 LRP12Q9Y561 859 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 CLPSL1A2RUU4 121 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 CCDC182A6NF36 153 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 KCNAB3O43448 404 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 GPR137BO60478 399 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 TGM4P49221 684 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 RASSF2P50749 326 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 SRSF4Q08170 494 aaKnown RBP17.32■□□□□ 0.36
VSX1-201ENST00000376707 ATP6AP1Q15904 470 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 DEGS2Q6QHC5 323 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 KRT74Q7RTS7 529 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 KRT77Q7Z794 578 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 ZDHHC23Q8IYP9 409 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 PIP4P2Q8N4L2 257 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 FAM81AQ8TBF8 368 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 LYZL4Q96KX0 146 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 RAB3IPQ96QF0 476 aaPredicted RBP17.32■□□□□ 0.36
VSX1-201ENST00000376707 DCTN5Q9BTE1 182 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 DNTTIP1Q9H147 329 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 WDR13Q9H1Z4 485 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 DPAGT1Q9H3H5 408 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 SIRT7Q9NRC8 400 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
VSX1-201ENST00000376707 PKD1L1Q8TDX9 2849 aa17.32■□□□□ 0.36
VSX1-201ENST00000376707 TRRAPQ9Y4A5 3859 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 ACOD1A6NK06 481 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 AKR7A2O43488 359 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 AMY2BP19961 511 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 IER3P46695 156 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 HCCSP53701 268 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 ROM1Q03395 351 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 LCN1P1Q5VSP4 162 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 KCTD18Q6PI47 426 aaPredicted RBP17.31■□□□□ 0.36
VSX1-201ENST00000376707 BRICD5Q6PL45 260 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 ITFG2Q969R8 447 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 MED30Q96HR3 178 aa17.31■□□□□ 0.36
VSX1-201ENST00000376707 PRKYO43930 277 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 ATP5HO75947 161 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 FBP1P09467 338 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 SELLP14151 372 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 EEF1B2P24534 225 aaKnown RBP17.3■□□□□ 0.36
VSX1-201ENST00000376707 DCTDP32321 178 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 EFNB1P98172 346 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 GUCA2AQ02747 115 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 FAM76BQ5HYJ3 339 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 METAP1DQ6UB28 335 aaPredicted RBP17.3■□□□□ 0.36
VSX1-201ENST00000376707 NPRL2Q8WTW4 380 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 HPSE2Q8WWQ2 592 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 LRTOMTQ8WZ04 291 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 DUS3LQ96G46 650 aaKnown RBP17.3■□□□□ 0.36
VSX1-201ENST00000376707 PRRG3Q9BZD7 231 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 FGF23Q9GZV9 251 aaPredicted RBP17.3■□□□□ 0.36
VSX1-201ENST00000376707 FAM206AQ9NX38 181 aa17.3■□□□□ 0.36
VSX1-201ENST00000376707 SLC25A10Q9UBX3 287 aaPredicted RBP17.3■□□□□ 0.36
VSX1-201ENST00000376707 A0A0U1RQV5 110 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 ZNF816-ZNF321PA0A0X1KG74 233 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 G3V2T6 193 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 MAP2K3P46734 347 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 GPM6AP51674 278 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 KDM4DQ6B0I6 523 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 ZNF788Q6ZQV5 615 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 COMMD2Q86X83 199 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 C8orf46Q8TAG6 207 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 ASB17Q8WXJ9 295 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 MROQ9BYG7 248 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 GABARAPL1Q9H0R8 117 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 SEMA6AQ9H2E6 1030 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 KRT84Q9NSB2 600 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 NLKQ9UBE8 527 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 RNF114Q9Y508 228 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 TMEM14AQ9Y6G1 99 aa17.29■□□□□ 0.36
VSX1-201ENST00000376707 BTBD17A6NE02 478 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 ZNF254O75437 659 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 TFF1P04155 84 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 MRPL3P09001 348 aaKnown RBP17.28■□□□□ 0.36
VSX1-201ENST00000376707 NDUFB7P17568 137 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 GLRA1P23415 457 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 FASP25445 335 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 EPHA2P29317 976 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 PRB3Q04118 309 aaPredicted RBP17.28■□□□□ 0.36
VSX1-201ENST00000376707 DGUOKQ16854 277 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 SLX4IPQ5VYV7 408 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 GDPGP1Q6ZNW5 385 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 ZNF679Q8IYX0 411 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 Q8N7P7 452 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 ANGPTL6Q8NI99 470 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 CITED1Q99966 193 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 AP4S1Q9Y587 144 aa17.28■□□□□ 0.36
VSX1-201ENST00000376707 TMEM269A0A1B0GVZ9 245 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 A0A1W2PQ09 198 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 A0A1W2PRD5 423 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 A0A1W2PRF3 423 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 A0A1W2PRM7 423 aa17.27■□□□□ 0.36
VSX1-201ENST00000376707 OR2AT4A6NND4 320 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms