RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SOHLH2Q9NX45 425 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 C5orf67F2Z3F1 127 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 WRBO00258 174 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 HPNP05981 417 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 BIDP55957 195 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 RAB2AP61019 212 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 CHRFAM7AQ494W8 412 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 CDPF1Q6NVV7 123 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 RPUSD3Q6P087 351 aaKnown RBP14.54□□□□□ -0.08
TRIM39-201ENST00000376656 TOLLIPQ9H0E2 274 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 SH3BGRL3Q9H299 93 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 ARV1Q9H2C2 271 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 C19orf12Q9NSK7 152 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 DMRT1Q9Y5R6 373 aa14.54□□□□□ -0.08
TRIM39-201ENST00000376656 CTSEP14091 401 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 TLE3Q04726 772 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 RHEBQ15382 184 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 H1FNTQ75WM6 255 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 TMEM156Q8N614 296 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 COMMD1Q8N668 190 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 LHFPL6Q9Y693 200 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 IGKV1-9A0A0C4DH69 117 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF729A6NN14 1252 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 BLVRBP30043 206 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 RPS23P62266 143 aaKnown RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 HSD11B2P80365 405 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 ZP4Q12836 540 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 TTLL10Q6ZVT0 673 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 PRSS58Q8IYP2 241 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 NPRL2Q8WTW4 380 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 WWTR1Q9GZV5 400 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 DUSP15Q9H1R2 295 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 KCNJ16Q9NPI9 418 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 LUZP4Q9P127 313 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 SPEGQ15772 3267 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 IFITM10A6NMD0 228 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF878C9JN71 531 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 SEMA6DQ8NFY4 1073 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 INTS12Q96CB8 462 aaKnown RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 C5orf34Q96MH7 638 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 PFDN5Q99471 154 aa14.53□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF701Q9NV72 531 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-201ENST00000376656 IFNA17P01571 189 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 SEC11BP0C7V7 166 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 RAB5CP51148 216 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF84P51523 738 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF121P58317 390 aaPredicted RBP14.52□□□□□ -0.08
TRIM39-201ENST00000376656 PYY3Q5JQD4 70 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 MESP1Q9BRJ9 268 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 ZNF2Q9BSG1 426 aaPredicted RBP14.52□□□□□ -0.08
TRIM39-201ENST00000376656 PECRQ9BY49 303 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 SLC35B3Q9H1N7 401 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 CERS4Q9HA82 394 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 POLR1DQ9Y2S0 133 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 HDGFL3Q9Y3E1 203 aa14.52□□□□□ -0.08
TRIM39-201ENST00000376656 IGKV3D-11A0A0A0MRZ8 115 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 MBPP02686 304 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-201ENST00000376656 PRH1P02810 166 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 CDAP32320 146 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 GFERP55789 205 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 KIAA0141Q14154 515 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-201ENST00000376656 SURF2Q15527 256 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-201ENST00000376656 TMEM240Q5SV17 173 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 SULF2Q8IWU5 870 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 FAM89BQ8N5H3 189 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 YPEL4Q96NS1 127 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 FBRSQ9HAH7 460 aa14.52□□□□□ -0.09
TRIM39-201ENST00000376656 PUS1Q9Y606 427 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRIM39-201ENST00000376656 IGHV5-51A0A0C4DH38 117 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 XRCC2O43543 280 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 OR2C1O95371 312 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 IFNA21P01568 189 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 PPP1CCP36873 323 aaKnown RBP14.51□□□□□ -0.09
TRIM39-201ENST00000376656 DCAF7P61962 342 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 SLC35A1P78382 337 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 HEPN1Q6WQI6 88 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 SGPP2Q8IWX5 399 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 SHDQ96IW2 340 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 PLEKHA2Q9HB19 425 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 FOXI3A8MTJ6 420 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-201ENST00000376656 ADAM10O14672 748 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 HOXA5P20719 270 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 RPS10P46783 165 aaKnown RBP14.51□□□□□ -0.09
TRIM39-201ENST00000376656 C16orf47Q6ZP98 133 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-201ENST00000376656 BADQ92934 168 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 CHST11Q9NPF2 352 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 PCDH15Q96QU1 1955 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 SHISA8B8ZZ34 492 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 DIRAS3O95661 229 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 KLK3P07288 261 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-201ENST00000376656 GIMD1P0DJR0 217 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 MFAP5Q13361 173 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 SP6Q3SY56 376 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 C1QL4Q86Z23 238 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 GINS3Q9BRX5 216 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 IGFLR1Q9H665 355 aa14.51□□□□□ -0.09
TRIM39-201ENST00000376656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms