RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 FAM221AA4D161 298 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 FZD6O60353 706 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 CD37P11049 281 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 CAPZBP47756 277 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 BTLAQ7Z6A9 289 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 H3BVH4 76 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 NPPBP16860 134 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 HOXA4Q00056 320 aaPredicted RBP11.27□□□□□ -0.61
VPS13A-204ENST00000376634 PDXPQ96GD0 296 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 SIRT3Q9NTG7 399 aaPredicted RBP11.27□□□□□ -0.61
VPS13A-204ENST00000376634 K7EQS6 105 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 TFAP2AP05549 437 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 DHRS4L2Q6PKH6 230 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 OSR2Q8N2R0 312 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 CMC2Q9NRP2 79 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
VPS13A-204ENST00000376634 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 FUT6P51993 359 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 LBHQ53QV2 105 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 KMT5CQ86Y97 462 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 TBC1D29Q9UFV1 150 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 GABARAPL3Q9BY60 117 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 BET1LQ9NYM9 111 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 NPTNQ9Y639 398 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 TUBAL3A6NHL2 446 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 IFITM5A6NNB3 132 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 M0R143 59 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 BCL2L11O43521 198 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 OR4E1P0C645 316 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 BMP5P22003 454 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 RELL2Q8NC24 303 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 CLEC2LP0C7M8 214 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 ZBTB25P24278 435 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 TMEM267Q0VDI3 215 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 SLC36A1Q7Z2H8 476 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 OR5A2Q8NGI9 324 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 GMLQ99445 158 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 LOXL2Q9Y4K0 774 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 SPCS3P61009 180 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 THAP10Q9P2Z0 257 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 SPRED3Q2MJR0 410 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 B3GNTL1Q67FW5 361 aaPredicted RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 HDGFL3Q9Y3E1 203 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 SNRPNP63162 240 aaKnown RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 TMEM99Q8N816 258 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 OR52N4Q8NGI2 321 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 RBM14Q96PK6 669 aaKnown RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 LKAAEAR1Q8TD35 194 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 MMP26Q9NRE1 261 aa11.26□□□□□ -0.61
VPS13A-204ENST00000376634 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
VPS13A-204ENST00000376634 MICBQ29980 383 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 TMEM52BQ4KMG9 183 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 MS4A6EQ96DS6 147 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 A0A1W2PN81 502 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CHRNA7P36544 502 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 RHOBP62745 196 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 SHBQ15464 509 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.25□□□□□ -0.61
VPS13A-204ENST00000376634 SDF2Q99470 211 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CTSLP07711 333 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 HFEQ30201 348 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CADM3Q8N126 398 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 OR52N5Q8NH56 324 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CLEC5AQ9NY25 188 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 MARF1Q9Y4F3 1742 aaKnown RBP11.25□□□□□ -0.61
VPS13A-204ENST00000376634 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 TMEM202A6NGA9 273 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 TNFSF15O95150 251 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 HGDQ93099 445 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 HTR1DP28221 377 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CGB2Q6NT52 195 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 WDR73Q6P4I2 378 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 ELOBQ15370 118 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 VWA2Q5GFL6 755 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 GGNBP1Q5YKI7 109 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 FIZ1Q96SL8 496 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 SARGQ9BW04 601 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 OCIAD1Q9NX40 245 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 TAAR3PQ9P1P4 343 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms