RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RCL1Q9Y2P8 373 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FRYLO94915 3013 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CST7O76096 145 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 BPNT1O95861 308 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 IFNA2P01563 188 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SPP1P10451 314 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CCL2P13500 99 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZBTB25P24278 435 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HAGHQ16775 308 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LDLRAD3Q86YD5 345 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ESRP2Q9H6T0 727 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C19orf25Q9UFG5 118 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RNF222A6NCQ9 220 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PIAS2O75928 621 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CRYBA1P05813 215 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FASLGP48023 281 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FHITP49789 147 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MPPED2Q15777 294 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CSRP2Q16527 193 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PLXDC2Q6UX71 529 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR52H1Q8NGJ2 320 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SPTSSAQ969W0 71 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 G6PC2Q9NQR9 355 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C1orf123Q9NWV4 160 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC7A11Q9UPY5 501 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CTRB1P17538 263 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CCR5P51681 352 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CTRB2Q6GPI1 263 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CCNL2Q96S94 520 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 UQCC1Q9NVA1 299 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ATPIF1Q9UII2 106 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MMP24Q9Y5R2 645 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TTC28Q96AY4 2481 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TNFSF11O14788 317 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TIAF1O95411 115 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ONECUT2O95948 504 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CD79AP11912 226 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TAS2R46P59540 309 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 THEM4Q5T1C6 240 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PGAP1Q75T13 922 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OVCH2Q7RTZ1 564 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF695Q8IW36 515 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 C17orf78Q8N4C9 275 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PURGQ9UJV8 347 aaKnown RBP12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 KCNS2Q9ULS6 477 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SRPK3Q9UPE1 567 aa12.71□□□□□ -0.38
TNFRSF1B-201ENST00000376259 A8MXK9 166 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TXNDC12O95881 172 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PTGFRP43088 359 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 BEND4Q6ZU67 534 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RTN4IP1Q8WWV3 396 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 MRPL24Q96A35 216 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PIK3IP1Q96FE7 263 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 C2orf50Q96LR7 162 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HIST1H2AAQ96QV6 131 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 LPAR5Q9H1C0 372 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TSPAN2O60636 221 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FLI1Q01543 452 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 MIDNQ504T8 468 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZFP62Q8NB50 900 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 MUC1P15941 1255 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NQO2P16083 231 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 DOK3Q7L591 496 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OR51H1Q8NH63 302 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF519Q8TB69 540 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RNF133Q8WVZ7 376 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FANCFQ9NPI8 374 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CYB5R1Q9UHQ9 305 aa12.7□□□□□ -0.38
TNFRSF1B-201ENST00000376259 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 POU2F2P09086 479 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 AFF3P51826 1226 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TMEM33P57088 247 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SLC16A14Q7RTX9 510 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NOXO1Q8NFA2 376 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 GJC3Q8NFK1 279 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OR9K2Q8NGE7 335 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF319Q9P2F9 582 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms