RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 OR51S1Q8NGJ8 323 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 SLC25A18Q9H1K4 315 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 BIVM-ERCC5R4GMW8 1640 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 ATP7BP35670 1465 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 NID2Q14112 1375 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 A0A0G2JMM0 328 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 A0A1W2PPB8 328 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 KIR3DP1A8MWS1 328 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 C17orf105B2RV13 164 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 RGRP47804 291 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 SP2Q02086 613 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 TROAPQ12815 778 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 SUSD4Q5VX71 490 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 SIRT6Q8N6T7 355 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 DNAJC4Q9NNZ3 241 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 KLK14Q9P0G3 267 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 PEG3Q9GZU2 1588 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 GDF9O60383 454 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 ATP1B1P05026 303 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 OR1E2P47887 323 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 ZNF260Q3ZCT1 412 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 TMEM155Q4W5P6 130 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 HENMT1Q5T8I9 393 aaKnown RBP5.4□□□□□ -1.54
SCN2A-202ENST00000375427 ALG14Q96F25 216 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 C5orf30Q96GV9 206 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 RHOVQ96L33 236 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 CD244Q9BZW8 370 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 FUT9Q9Y231 359 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 FLVCR1Q9Y5Y0 555 aa5.4□□□□□ -1.54
SCN2A-202ENST00000375427 A0A087WV62 115 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SULT2B1O00204 365 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 TIMM8AO60220 97 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ZNF26P17031 533 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 HLA-GP17693 338 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SEC11AP67812 179 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 RING1Q06587 406 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 FAM110CQ1W6H9 321 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 GJD4Q96KN9 370 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ONECUT1Q9UBC0 465 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 OR11H12B2RN74 326 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SDCBPO00560 298 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 TAPBPO15533 448 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 CSO75390 466 aaKnown RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ZNF688P0C7X2 276 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 HRH1P35367 487 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 NPEPL1Q8NDH3 523 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 GJC3Q8NFK1 279 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 OR11H1Q8NG94 326 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 OR11H2Q8NH07 326 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 OR52N1Q8NH53 320 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 HRASLS5Q96KN8 279 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 C1QTNF3Q9BXJ4 246 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SMG9Q9H0W8 520 aaKnown RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 A4GNTQ9UNA3 340 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 GPR55Q9Y2T6 319 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 H3BRM9 83 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 CDC42EP2O14613 210 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ACOT8O14734 319 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 NCR2O95944 276 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 AMHP03971 560 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SPINK8P0C7L1 97 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SUMO3P55854 103 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 HBBP68871 147 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 EMX1Q04741 257 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 C17orf67Q0P5P2 114 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 PCBP2Q15366 365 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SMIM21Q3B7S5 101 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ZNF766Q5HY98 468 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 ZNF322Q6U7Q0 402 aaPredicted RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 OR1N1Q8NGS0 311 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 SLC52A3Q9NQ40 469 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 NHP2Q9NX24 153 aaKnown RBP5.4□□□□□ -1.55
SCN2A-202ENST00000375427 COL15A1P39059 1388 aa5.4□□□□□ -1.55
SCN2A-202ENST00000375427 HS3ST1O14792 307 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 GPANK1O95872 356 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 CD74P04233 296 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 HBQ1P09105 142 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 TBXA2RP21731 343 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 P2RY1P47900 373 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 BTG2P78543 158 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 FPGSQ05932 587 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 IGFBP7Q16270 282 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 STRADBQ9C0K7 418 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 VN1R1Q9GZP7 353 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 EGLN1Q9GZT9 426 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 GORASP2Q9H8Y8 452 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 CHST7Q9NS84 486 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 KDM5DQ9BY66 1539 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 PIRTP0C851 137 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 RPS4Y1P22090 263 aaKnown RBP5.39□□□□□ -1.55
SCN2A-202ENST00000375427 CTXN1P60606 82 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 HIST1H1AQ02539 215 aaPredicted RBP5.39□□□□□ -1.55
SCN2A-202ENST00000375427 ECM1Q16610 540 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 ARRDC1Q8N5I2 433 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 OR52B6Q8NGF0 335 aa5.39□□□□□ -1.55
SCN2A-202ENST00000375427 OR10AC1Q8NH08 325 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms