RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HPSE2Q8WWQ2 592 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FBXO34Q9NWN3 711 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 A0A1B0GTH9 108 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 K7EPK0 472 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 NID1P14543 1247 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 BPIFB3P59826 476 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 UBE2KP61086 200 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF343Q6P1L6 599 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 MED25Q71SY5 747 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 C5orf24Q7Z6I8 188 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 TRAPPC6BQ86SZ2 158 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF679Q8IYX0 411 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FAM71E2Q8N5Q1 922 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 JSRP1Q96MG2 331 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-203ENST00000375315 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ULBP3Q9BZM4 244 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 GSKIPQ9P0R6 139 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 PITPNC1Q9UKF7 332 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 PILRBQ9UKJ0 227 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 TMEM131Q92545 1883 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FAM171A2A8MVW0 826 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FOXS1O43638 330 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 PRH1P02810 166 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 CPMP14384 443 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 CXCR1P25024 350 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 RPL12P30050 165 aaKnown RBP10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FAM166AQ6J272 317 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ADGRE4PQ86SQ3 457 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 FJX1Q86VR8 437 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 ZNF619Q8N2I2 560 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 LRRC18Q8N456 261 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 RNASEH2CQ8TDP1 164 aaKnown RBP10.78□□□□□ -0.68
C9orf3-203ENST00000375315 HS3ST3B1Q9Y662 390 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 GVINP1Q7Z2Y8 2422 aa10.78□□□□□ -0.68
C9orf3-203ENST00000375315 A0A087WV62 115 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 RAMP1O60894 148 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 DFFBO76075 338 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 DANCRP0C864 163 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 GLB1P16278 677 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 EPHA8P29322 1005 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-203ENST00000375315 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SLC35A1P78382 337 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 CCL7P80098 99 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SLC9A3R2Q15599 337 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 RNF44Q7L0R7 432 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 PLPP7Q8NBV4 271 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SEMA6DQ8NFY4 1073 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 OR13C9Q8NGT0 318 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 FAM174AQ8TBP5 190 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 NT5CQ8TCD5 201 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 MARCH1Q8TCQ1 289 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF681Q96N22 645 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SDF2Q99470 211 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 FGF21Q9NSA1 209 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 LAMP5Q9UJQ1 280 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 LRP4O75096 1905 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 KIF26BQ2KJY2 2108 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 TGIF2-C20orf24A0A0A6YYL0 155 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 CDC14CA4D256 554 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 TLCD2A6NGC4 264 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 NUDT21O43809 227 aaKnown RBP10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SFT2D2O95562 160 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 ABHD16AO95870 558 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 MSX1P28360 303 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 FCGR2CP31995 323 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 HRH1P35367 487 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 FHL1Q13642 323 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 DCAF10Q5QP82 559 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SAPCD1Q5SSQ6 148 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 DPY19L2P2Q6ZN68 376 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF101Q8IZC7 436 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 PLPP5Q8NEB5 264 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 OR1L3Q8NH93 324 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 FRZBQ92765 325 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 NMNAT2Q9BZQ4 307 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 SLC26A1Q9H2B4 701 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 RIMS4Q9H426 269 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-203ENST00000375315 CKLFQ9UBR5 152 aa10.77□□□□□ -0.69
C9orf3-203ENST00000375315 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
C9orf3-203ENST00000375315 IGHV3-20A0A0C4DH32 117 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 SEC11BP0C7V7 166 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 TBPP20226 339 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 GLYATL3Q5SZD4 288 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 PLXDC1Q8IUK5 500 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 EXD3Q8N9H8 876 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 DTWD2Q8NBA8 298 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 OR4N2Q8NGD1 307 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 TSLPQ969D9 159 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 DNAJA3Q96EY1 480 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 CMKLR1Q99788 373 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 GTF2A1LQ9UNN4 478 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 ALPK2Q86TB3 2170 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 H3BQ15 152 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 GABRA3P34903 492 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms