RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ST3GAL6Q9Y274 331 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF141Q15928 474 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 NUFIP2Q7Z417 695 aaKnown RBP9.17□□□□□ -0.94
PTCH1-204ENST00000375290 C20orf196Q8IYI0 205 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 C4orf45Q96LM5 186 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 LILRA5A6NI73 299 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF813Q6ZN06 617 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 Q6ZNB5 142 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 CPEB2Q7Z5Q1 589 aaKnown RBP9.17□□□□□ -0.94
PTCH1-204ENST00000375290 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
PTCH1-204ENST00000375290 ZBTB25P24278 435 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 NKG7Q16617 165 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 NOXO1Q8NFA2 376 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM9BQ9NQ34 198 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PPP1R14DQ9NXH3 145 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PISDQ9UG56 409 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 ZNFX1Q9P2E3 1918 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PMS2P1A4D2B8 440 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 TCAPO15273 167 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PMCHP20382 165 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 YARS2Q9Y2Z4 477 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 SCRG1O75711 98 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 CLEC3BP05452 202 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 GNG4P50150 75 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 SUCLG1P53597 346 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PMS2P11Q13670 270 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 ZMAT3Q9HA38 289 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 CGGBP1Q9UFW8 167 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 CCSO14618 274 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PEX11BO96011 259 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 KLKB1P03952 638 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 QSER1Q2KHR3 1735 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 LINC00052Q96N35 136 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 UTP23Q9BRU9 249 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 OR5V1Q9UGF6 321 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF528Q3MIS6 628 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PLA2G12AQ9BZM1 189 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 A0A1W2PQD3 144 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 FGF2P09038 288 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 LSM6P62312 80 aaKnown RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM104Q8NE00 496 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 FER1L6-AS2Q96M78 137 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 COMMD5Q9GZQ3 224 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 KCNK15Q9H427 330 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 A0A1B0GU03 582 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 PTTG1IPP53801 180 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
PTCH1-204ENST00000375290 MYOZ1Q9NP98 299 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF230Q9UIE0 474 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-204ENST00000375290 FSTP19883 344 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 USF1P22415 310 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-204ENST00000375290 GDF1P27539 372 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 PRAMEF5Q5TYX0 476 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 PRAMEF6Q5VXH4 476 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 OR5AU1Q8NGC0 362 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 OR51E1Q8TCB6 317 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 THAP3Q8WTV1 239 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-204ENST00000375290 SLC2A8Q9NY64 477 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 DICER1Q9UPY3 1922 aaKnown RBP9.15□□□□□ -0.94
PTCH1-204ENST00000375290 BMI1P35226 326 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 SQSTM1Q13501 440 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 CEBPEQ15744 281 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 RNF151Q2KHN1 245 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 STUMQ69YW2 141 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 LRP11Q86VZ4 500 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 ZDHHC23Q8IYP9 409 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-204ENST00000375290 CCDC74BQ96LY2 380 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM147Q9BVK8 224 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF385BQ569K4 471 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 RNF175Q8N4F7 328 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM56Q96MV1 263 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 NTHL1P78549 312 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 TNFRSF12AQ9NP84 129 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 NHLRC3Q5JS37 347 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF738Q8NE65 137 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 DSPPQ9NZW4 1301 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 A0A0B4J203 849 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 TMPRSS11DO60235 418 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 OR10J4P0C629 311 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM33P57088 247 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 ETFDHQ16134 617 aa9.15□□□□□ -0.94
PTCH1-204ENST00000375290 OR5B21A6NL26 309 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 NMBP08949 121 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 CDKN2AP42771 156 aaKnown RBP9.15□□□□□ -0.95
PTCH1-204ENST00000375290 CAPZBP47756 277 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF79Q15937 498 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM211Q6ICI0 200 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 ZPBPQ9BS86 351 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-204ENST00000375290 M0R1X1 148 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 GPR3P46089 330 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF761Q86XN6 746 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms