RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 MRGPRX4Q96LA9 322 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 TAAR6Q96RI8 345 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 SRRQ9GZT4 340 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 IFITM5A6NNB3 132 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 ALG1L2C9J202 215 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 CBR3O75828 277 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 GABRB1P18505 474 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 PMCHP20382 165 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 B3GNTL1Q67FW5 361 aaPredicted RBP13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 OR1L4Q8NGR5 311 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 GPR87Q9BY21 358 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 A0A087WUJ7 227 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 DHHO43323 396 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 IL5P05113 134 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 BPIFB3P59826 476 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 OR2M7Q8NG81 312 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 OR4C16Q8NGL9 310 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 OR1L3Q8NH93 324 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 CLDN23Q96B33 292 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
NOTCH4-201ENST00000375023 VAMP5O95183 116 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 NTN1O95631 604 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 ZDHHC11BP0C7U3 371 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 CCR5P51681 352 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 EMC4Q5J8M3 183 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 OR2A14Q96R47 310 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 MMP25Q9NPA2 562 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 NPAP1Q9NZP6 1156 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 TMEM129A0AVI4 362 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 GYPAP02724 150 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 CTXN2P0C2S0 81 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 FZD5Q13467 585 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 SPACA9Q96E40 222 aaPredicted RBP13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 POMT2Q9UKY4 750 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 GPNMBQ14956 572 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 SMIM21Q3B7S5 101 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF788Q6ZQV5 615 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 FAM122BQ7Z309 247 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 TIGITQ495A1 244 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 MRGPREQ86SM8 312 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 ST8SIA1Q92185 356 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 ARHGDIGQ99819 225 aa13.19□□□□□ -0.3
NOTCH4-201ENST00000375023 BTAF1O14981 1849 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 CDK5R1Q15078 307 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 BAK1Q16611 211 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 PPP1R1CQ8WVI7 109 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 FBXO34Q9NWN3 711 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 CPN1P15169 458 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 TFPI2P48307 235 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 OR4C3Q8NH37 302 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 PECRQ9BY49 303 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 ZNF117Q03924 483 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 TGIF2LYQ8IUE0 185 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 A0A1W2PNV4 684 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 ANKUB1A6NFN9 424 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 LALBAP00709 142 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 ARRB2P32121 409 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
NOTCH4-201ENST00000375023 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 PF4P02776 101 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ATF1P18846 271 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 GALNSP34059 522 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 OR2F1Q13607 317 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 OR1F12Q8NHA8 337 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TMEM171Q8WVE6 324 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TCRBV5S2A0A599 114 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 SULT1A3P0DMM9 295 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 SULT1A4P0DMN0 295 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 PNLIPRP2P54317 469 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 SLC37A1P57057 533 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 Q3ZCU0 254 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 FAM219AQ8IW50 185 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 CORO2AQ92828 525 aa13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 HSD17B10Q99714 261 aaKnown RBP13.17□□□□□ -0.3
NOTCH4-201ENST00000375023 TEX101Q9BY14 249 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms