RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SEZ6L2Q6UXD5 910 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ASCL4Q6XD76 172 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 NUDCD2Q8WVJ2 157 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SLC25A21Q9BQT8 299 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 REPIN1Q9BWE0 567 aaKnown RBP15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SLC2A8Q9NY64 477 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 KCNN3Q9UGI6 736 aa15.6■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ACACBO00763 2458 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 C5orf49A4QMS7 147 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 ANXA3P12429 323 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RAD52P43351 418 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 RBP2P50120 134 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TMEM50BP56557 158 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 DMRTC1Q5HYR2 192 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 TFAP2EQ6VUC0 442 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 SLC36A1Q7Z2H8 476 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 BEST4Q8NFU0 473 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 OPA3Q9H6K4 179 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 BEX1Q9HBH7 125 aa15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 GPN1Q9HCN4 374 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 PAIP2BQ9ULR5 123 aaKnown RBP15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 URB1O60287 2271 aaKnown RBP15.59■□□□□ 0.09
HLA-DQB1-201ENST00000374943 IGKV1-27A0A075B6S5 117 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MEIKINA0A087WXM9 373 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SSNA1O43805 119 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 NAT1P18440 290 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ANXA7P20073 488 aaKnown RBP15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CPT2P23786 658 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FUT6P51993 359 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GNG2P59768 71 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ARL6IP1Q15041 203 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF626Q68DY1 528 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR51T1Q8NGJ9 327 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 DACT3Q96B18 629 aaPredicted RBP15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 BORCS8Q96FH0 119 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TRIB1Q96RU8 372 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TINAGL1Q9GZM7 467 aaPredicted RBP15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IFT46Q9NQC8 304 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 KCNK7Q9Y2U2 307 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 NPTNQ9Y639 398 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZFHX4Q86UP3 3567 aa15.58■□□□□ 0.08
HLA-DQB1-201ENST00000374943 DISC1C4P0D8 188 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 M0QYG6 137 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 KLK10O43240 276 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CA11O75493 328 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CNOT4O95628 575 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 AMY2AP04746 511 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SERPINA2P20848 420 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 EIF2S3P41091 472 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MRPS15P82914 257 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GTF3C1Q12789 2109 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MALLQ13021 153 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 HIKESHIQ53FT3 197 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FAM214BQ7L5A3 538 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 WNT2BQ93097 391 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MS4A3Q96HJ5 214 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ARHGAP5-AS1Q96IT6 56 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TAAR6Q96RI8 345 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ALX4Q9H161 411 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 METTL9Q9H1A3 318 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IL36GQ9NZH8 169 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SCP2D1Q9UJQ7 156 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SLC7A11Q9UPY5 501 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CELSR3Q9NYQ7 3312 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FAM230AA0A1W2PPH8 454 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 OR14I1A6ND48 311 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CREBL2O60519 120 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF780AO75290 641 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 FCER2P06734 321 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 TMEM225BP0DP42 221 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CXCL3P19876 107 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CBX5P45973 191 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ATP1B3P54709 279 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GK2Q14410 553 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RNASE10Q5GAN6 216 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 Q6ZS92 163 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RTN4RL2Q86UN3 420 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 CCDC36Q8IYA8 594 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 BPIFB2Q8N4F0 458 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SPICQ8N5J4 248 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PXT1Q8NFP0 134 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ST8SIA4Q92187 359 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 Q96M66 194 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 ZNF75AQ96N20 296 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PRRT1Q99946 306 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 SEC22CQ9BRL7 303 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MYOZ1Q9NP98 299 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PTTG3PQ9NZH4 202 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PLEKHA6Q9Y2H5 1048 aa15.57■□□□□ 0.08
HLA-DQB1-201ENST00000374943 MAP1BP46821 2468 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 AKAP13Q12802 2813 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 WISP2O76076 250 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 VSIG10L2P0DP72 767 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 APLNRP35414 380 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PRSS12P56730 875 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PPA1Q15181 289 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 PLCXD3Q63HM9 321 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 RTL6Q6ICC9 239 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 IDO2Q6ZQW0 420 aa15.56■□□□□ 0.08
HLA-DQB1-201ENST00000374943 GVQW1Q8N7I0 195 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms