RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ACER3Q9NUN7 267 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 OR5V1Q9UGF6 321 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ST3GAL6Q9Y274 331 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 ACVR1Q04771 509 aa12.87□□□□□ -0.35
TRAF1-201ENST00000373887 SERTM1A2A2V5 107 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZBTB25P24278 435 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 DCTDP32321 178 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PSMB2P49721 201 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PDCD1Q15116 288 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 BCL2L2Q92843 193 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ADGRG7Q96K78 797 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 CHRDL1Q9BU40 450 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 TXNIPQ9H3M7 391 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PLEKHA2Q9HB19 425 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 TMEM129A0AVI4 362 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 IL5P05113 134 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 NPY1RP25929 384 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PTBP1P26599 531 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF574Q6ZN55 896 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 SLC38A6Q8IZM9 456 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 OR2M3Q8NG83 312 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 SHROOM3Q8TF72 1996 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 TTRP02766 147 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 DHODHQ02127 395 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PRO1933Q9H354 126 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 OCIAD1Q9NX40 245 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ARRB2P32121 409 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 FABP5Q01469 135 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 XKR7Q5GH72 579 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 C19orf35Q6ZS72 473 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 PTRH1Q86Y79 214 aaKnown RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 OR52N4Q8NGI2 321 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 LRP5O75197 1615 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 TRAV20A0A0B4J274 112 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF121P58317 390 aaPredicted RBP12.86□□□□□ -0.35
TRAF1-201ENST00000373887 CLN3Q13286 438 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 AANATQ16613 207 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF485Q8NCK3 441 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 OR4S1Q8NGB4 309 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 R4GMQ9 66 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
TRAF1-201ENST00000373887 FRG2CA6NGY1 282 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 FZD6O60353 706 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 NEURL1O76050 574 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 AKR7LQ8NHP1 331 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 PPP1R1CQ8WVI7 109 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 POM121L2Q96KW2 1035 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 KIAA1324LA8MWY0 1029 aaPredicted RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 GALMQ96C23 342 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 IGHV1OR21-1A0A087WYE8 117 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 A0A1B0GTL3 188 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 MED19A0JLT2 244 aaPredicted RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 DEFB108AA8MXU0 73 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 CRYBA1P05813 215 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 GALR1P47211 349 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 CAMKMTQ7Z624 323 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 A0A1B0GTQ1 180 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 HPP00738 406 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 FAM53BQ14153 422 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 AGERQ15109 404 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 NPEPL1Q8NDH3 523 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 SPACA9Q96E40 222 aaPredicted RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 WDR89Q96FK6 387 aaPredicted RBP12.85□□□□□ -0.35
TRAF1-201ENST00000373887 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 FBP1P09467 338 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 GPX2P18283 190 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 OPRK1P41145 380 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF83P51522 516 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 BAP18Q8IXM2 172 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 OSR2Q8N2R0 312 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 MVB12AQ96EY5 273 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 TOLLIPQ9H0E2 274 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 RHOFQ9HBH0 211 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
TRAF1-201ENST00000373887 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms