RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 OR2A2Q6IF42 318 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 NLRC3Q7RTR2 1065 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 LYG2Q86SG7 212 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 GLCCI1Q86VQ1 547 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5AP2Q8NGF4 316 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR51T1Q8NGJ9 327 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 COQ8AQ8NI60 647 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 LRRC20Q8TCA0 184 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ST8SIA4Q92187 359 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 EMG1Q92979 244 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 GMPPAQ96IJ6 420 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 SELENOIQ9C0D9 397 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ZDHHC11Q9H8X9 412 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 DEPPQ9NTK1 212 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 DECR2Q9NUI1 292 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MED9Q9NWA0 146 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 UBQLN2Q9UHD9 624 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC23A1Q9UHI7 598 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OPN4Q9UHM6 478 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 KIF25Q9UIL4 384 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MPC1Q9Y5U8 109 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 TRGV5A0A0B4J1U4 118 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 TRAV17A0A0B4J275 112 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 IGKV1-9A0A0C4DH69 117 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PMS2P1A4D2B8 440 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM235A6NFC5 223 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5B21A6NL26 309 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 RFPL4AA6NLU0 287 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PRR33A8MZF0 331 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 RFPL4AL1F8VTS6 287 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 H7C1Q1 480 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 L7N2F9 121 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 B3GALNT1O75752 331 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 MPIG6BO95866 241 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OPN1LWP04000 364 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 CTXN2P0C2S0 81 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 SELEP16581 610 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 CXCL3P19876 107 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 S100A11P31949 105 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 TSPAN5P62079 268 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PPIAP62937 165 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 ARFRP1Q13795 201 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 RSU1Q15404 277 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 CCDC157Q569K6 752 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 CLLU1Q5K131 121 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PHYHD1Q5SRE7 291 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 LAMTOR1Q6IAA8 161 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM211Q6ICI0 200 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 DHRS13Q6UX07 377 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 SSX8Q7RTT4 187 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 WDFY1Q8IWB7 410 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 MKXQ8IYA7 352 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 LRRC18Q8N456 261 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM251Q8N6I4 163 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 DTX3Q8N9I9 347 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 ACBD4Q8NC06 268 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 C1orf162Q8NEQ5 155 aaPredicted RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5A2Q8NGI9 324 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5M8Q8NGP6 311 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5H2Q8NGV7 314 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 FBXW5Q969U6 566 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 PHYHIPLQ96FC7 376 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 HIST1H2AAQ96QV6 131 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 SMAD5Q99717 465 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 NMES1Q9C002 83 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 POFUT1Q9H488 388 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 RAB18Q9NP72 206 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 OBP2BQ9NPH6 170 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 MRPL15Q9P015 296 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 MEMO1Q9Y316 297 aa7.6□□□□□ -1.19
SNRNP40-202ENST00000373720 A0A087WV48 116 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 hCG_38984A0A1B0GV85 526 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 A8MV72 311 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 NOS1APO75052 506 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 DIRAS3O95661 229 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 CRHP06850 196 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ACAA1P09110 424 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 CEACAM1P13688 526 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 PPP3CBP16298 524 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ANXA7P20073 488 aaKnown RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ZBTB25P24278 435 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 CD34P28906 385 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 BLVRBP30043 206 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 PTGER4P35408 488 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 MEOX1P50221 254 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 TNFSF10P50591 281 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ZP1P60852 638 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 EIF5AP63241 154 aaKnown RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ARG2P78540 354 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 IL13RA1P78552 427 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 FAM3AP98173 230 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 DHRS2Q13268 280 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 UBE2V2Q15819 145 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 MPV17LQ2QL34 196 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 RNASE12Q5GAN4 147 aaKnown RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF766Q5HY98 468 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms