RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FFAR4Q5NUL3 377 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 ACSM6Q6P461 480 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 TMEM179BQ7Z7N9 219 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 CHAC2Q8WUX2 184 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 H3BP45 60 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 AANATQ16613 207 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 HFEQ30201 348 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 WIPI1Q5MNZ9 446 aaPredicted RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 NHLRC1Q6VVB1 395 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 OR5D13Q8NGL4 314 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 DERL3Q96Q80 235 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 ZNF768Q9H5H4 540 aaKnown RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 KLK11Q9UBX7 282 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 PLEKHB1Q9UF11 243 aaPredicted RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 A0A1W2PN81 502 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 CST7O76096 145 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 KRASP01116 189 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 RPL7P18124 248 aaKnown RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 CHRNA7P36544 502 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 PRRX1P54821 245 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 C12orf73Q69YU5 71 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 OR13G1Q8NGZ3 307 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 P4HTMQ9NXG6 502 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 TGFBR1P36897 503 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 SEBOXQ9HB31 216 aaPredicted RBP10.33□□□□□ -0.76
VCL-202ENST00000372755 AKIP1Q9NQ31 210 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 THYN1Q9P016 225 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 ICAM5Q9UMF0 924 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 A0A0B4J2E0 115 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 A0A1B0GX12 115 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 PMCHP20382 165 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GZMKP49863 264 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 IL11RAQ14626 422 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 TMEM211Q6ICI0 200 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 CLEC9AQ6UXN8 241 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 OR4C3Q8NH37 302 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GPANK1O95872 356 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GNG10P50151 68 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GUCA2AQ02747 115 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 SLC38A11Q08AI6 406 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GPR137Q96N19 417 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 DOK1Q99704 481 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 SPNS1Q9H2V7 528 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 PARD6AQ9NPB6 346 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 F5H697 171 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 CXCL10P02778 98 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 LPAR6P43657 344 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 OTPQ5XKR4 325 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 BTNL3Q6UXE8 466 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 DHRS3O75911 302 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 GP1BAP07359 652 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 CEACAM3P40198 252 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 MEOX1P50221 254 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 NPEPL1Q8NDH3 523 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 CADM4Q8NFZ8 388 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 ORAI1Q96D31 301 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 MMP25Q9NPA2 562 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
VCL-202ENST00000372755 PYCARD-AS1I3L0S3 204 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 EDIL3O43854 480 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 FCGR3BO75015 233 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ADAM11O75078 769 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 LIMK1P53667 647 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 GUK1Q16774 197 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ANKRD34AQ69YU3 496 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 TMPRSS11FQ6ZWK6 438 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ANKRD53Q8N9V6 530 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ESRP2Q9H6T0 727 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 UBR2Q8IWV8 1755 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 MS4A18H0YCH9 400 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 K7EQS6 105 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 KLK10O43240 276 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 CCKARP32238 428 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ZNF83P51522 516 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 SPCS3P61009 180 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 TMEM267Q0VDI3 215 aaPredicted RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 MS4A18Q3C1V0 323 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 RNASEKQ6P5S7 137 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 PPIL1Q9Y3C6 166 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ONECUT2O95948 504 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ORM1P02763 201 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 GNG4P50150 75 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 ZNF117Q03924 483 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 NUFIP2Q7Z417 695 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 CXorf67Q86X51 503 aaPredicted RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 NKX2-2O95096 273 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 PNPP00491 289 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 HIST1H1DP16402 221 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 TIPARPQ7Z3E1 657 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 DPF1Q92782 380 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 MTCH2Q9Y6C9 303 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms