RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RPS27AP62979 156 aaKnown RBP21.67■■□□□ 1.06
CTSA-203ENST00000372459 LHFPL2Q6ZUX7 228 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 STEAP2Q8NFT2 490 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 BCL2L2Q92843 193 aaPredicted RBP21.67■■□□□ 1.06
CTSA-203ENST00000372459 ZNF816-ZNF321PA0A0X1KG74 233 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 A0A1B0GUH1 482 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 ZNF736B4DX44 427 aaPredicted RBP21.66■■□□□ 1.06
CTSA-203ENST00000372459 TPOP07202 933 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 GSTP1P09211 210 aaKnown RBP21.66■■□□□ 1.06
CTSA-203ENST00000372459 PER3P56645 1201 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 HIKESHIQ53FT3 197 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 METTL11BQ5VVY1 283 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 OR51S1Q8NGJ8 323 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 OR51T1Q8NGJ9 327 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 APOBEC3DQ96AK3 386 aaPredicted RBP21.66■■□□□ 1.06
CTSA-203ENST00000372459 BORCS8Q96FH0 119 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 TECTBQ96PL2 329 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 TAAR6Q96RI8 345 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 GINS4Q9BRT9 223 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 LOC400499M0QZD8 3231 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 CEP250Q9BV73 2442 aa21.66■■□□□ 1.06
CTSA-203ENST00000372459 FAM230AA0A1W2PPH8 454 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 SOCS1O15524 211 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 CD74P04233 296 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 CCL2P13500 99 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 MGMTP16455 207 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 MECP2P51608 486 aaKnown RBP21.65■■□□□ 1.06
CTSA-203ENST00000372459 ZP1P60852 638 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 FAM214BQ7L5A3 538 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 BEST4Q8NFU0 473 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 OR5M9Q8NGP3 310 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 NUDCD2Q8WVJ2 157 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 POM121L2Q96KW2 1035 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 ELL3Q9HB65 397 aaPredicted RBP21.65■■□□□ 1.06
CTSA-203ENST00000372459 KCNN3Q9UGI6 736 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 SCP2D1Q9UJQ7 156 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 MED12LQ86YW9 2145 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 HIST1H1DP16402 221 aaKnown RBP21.65■■□□□ 1.06
CTSA-203ENST00000372459 SERPINA2P20848 420 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 RBP2P50120 134 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 MALLQ13021 153 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 IKZF1Q13422 519 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 TFAP2EQ6VUC0 442 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 GCNT2Q8N0V5 402 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 FAM89BQ8N5H3 189 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 OR11H4Q8NGC9 324 aa21.65■■□□□ 1.06
CTSA-203ENST00000372459 ZNHIT1O43257 154 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 SSNA1O43805 119 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 TMEM225BP0DP42 221 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 PLAC9Q5JTB6 97 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 SEZ6L2Q6UXD5 910 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 IFT46Q9NQC8 304 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 DLL4Q9NR61 685 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 SLC7A11Q9UPY5 501 aa21.64■■□□□ 1.05
CTSA-203ENST00000372459 APLNRP35414 380 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 GUSBP1Q15486 140 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 MYO7BQ6PIF6 2116 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 GLDNQ6ZMI3 551 aaPredicted RBP21.63■■□□□ 1.05
CTSA-203ENST00000372459 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
CTSA-203ENST00000372459 OR8H1Q8NGG4 311 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 OR10K1Q8NGX5 313 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 PIGCQ92535 297 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 WNT2BQ93097 391 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 MED30Q96HR3 178 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 REPIN1Q9BWE0 567 aaKnown RBP21.63■■□□□ 1.05
CTSA-203ENST00000372459 TM2D1Q9BX74 207 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 METTL9Q9H1A3 318 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 SERPINA5P05154 406 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 FUT6P51993 359 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 TMEM50BP56557 158 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 TGFBR3Q03167 851 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 FOXC1Q12948 553 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 MEF2DQ14814 521 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 PNLIPRP3Q17RR3 467 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 Q6ZS92 163 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 MOB3CQ70IA8 216 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 MS4A3Q96HJ5 214 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 RADILQ96JH8 1075 aa21.63■■□□□ 1.05
CTSA-203ENST00000372459 NPDC1Q9NQX5 325 aaPredicted RBP21.63■■□□□ 1.05
CTSA-203ENST00000372459 AHRRA9YTQ3 701 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 PYCARD-AS1I3L0S3 204 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 M0QYG6 137 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 NOS1APO75052 506 aaPredicted RBP21.62■■□□□ 1.05
CTSA-203ENST00000372459 HPXP02790 462 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 IL5P05113 134 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 CPT2P23786 658 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 RAD52P43351 418 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 GK2Q14410 553 aaPredicted RBP21.62■■□□□ 1.05
CTSA-203ENST00000372459 PLCXD3Q63HM9 321 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 TEX261Q6UWH6 196 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 ANGPTL6Q8NI99 470 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 TINAGL1Q9GZM7 467 aaPredicted RBP21.62■■□□□ 1.05
CTSA-203ENST00000372459 U3KQ87 197 aa21.62■■□□□ 1.05
CTSA-203ENST00000372459 IGKV1-27A0A075B6S5 117 aa21.61■■□□□ 1.05
CTSA-203ENST00000372459 OR14I1A6ND48 311 aa21.61■■□□□ 1.05
CTSA-203ENST00000372459 TSC22D2O75157 780 aa21.61■■□□□ 1.05
CTSA-203ENST00000372459 AMY2AP04746 511 aa21.61■■□□□ 1.05
CTSA-203ENST00000372459 ANXA7P20073 488 aaKnown RBP21.61■■□□□ 1.05
CTSA-203ENST00000372459 DNASE1P24855 282 aa21.61■■□□□ 1.05
CTSA-203ENST00000372459 EIF2S3P41091 472 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms