RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PLK3Q9H4B4 646 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 CLCF1Q9UBD9 225 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 TRAPPC4Q9Y296 219 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 SERPINE3A8MV23 424 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 CYB5R3P00387 301 aaPredicted RBP12□□□□□ -0.49
RAPGEF1-201ENST00000372189 CCDC190Q86UF4 302 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR5AS1Q8N127 324 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR2G2Q8NGZ5 317 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 ATF6BQ99941 703 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 NEURL2Q9BR09 285 aa12□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZNF346Q9UL40 294 aaKnown RBP12□□□□□ -0.49
RAPGEF1-201ENST00000372189 A0A1B0GV90 55 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 FITM1A5D6W6 292 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 G3V3Q6 166 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 NME2P1O60361 137 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 M1APQ8TC57 530 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 ELOA3CA0A087WX78 387 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 TRGV5A0A0B4J1U4 118 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR2M5A3KFT3 312 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZNF724A8MTY0 619 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 LMX1BO60663 402 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CRYAAP02489 173 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 EDDM3BP56851 147 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 DUSP2Q05923 314 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 C1orf185Q5T7R7 199 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 KIRREL1Q96J84 757 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 MCM3APO60318 1980 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 A0A1B0GTQ1 180 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 SLC2A10O95528 541 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 SDHAP31040 664 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 AGERQ15109 404 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 DOK3Q7L591 496 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 TMED6Q8WW62 240 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 PLSCR3Q9NRY6 295 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 COX11Q9Y6N1 276 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 K7EQM0 130 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 ADRA2CP18825 462 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 IL3RAP26951 378 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 TPBGQ13641 420 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR2A2Q6IF42 318 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 SCGB1D4Q6XE38 83 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 MRPL52Q86TS9 123 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 SEH1LQ96EE3 360 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 BCL2L10Q9HD36 194 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 TNFRSF12AQ9NP84 129 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 LINC01387J3KSC0 135 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 DCTN6O00399 190 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 HSD17B6O14756 317 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 PDGFBP01127 241 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CTRB1P17538 263 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CD82P27701 267 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CD80P33681 288 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 CTRB2Q6GPI1 263 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 PIGTQ969N2 578 aa11.99□□□□□ -0.49
RAPGEF1-201ENST00000372189 TBXA2RP21731 343 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 SOX18P35713 384 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR11G2Q8NGC1 345 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 GNPNAT1Q96EK6 184 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 CHODLQ9H9P2 273 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 HDGFL3Q9Y3E1 203 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 HSPB2A8KAH6 182 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 TGM1P22735 817 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR10A3P58181 314 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 FOXF1Q12946 379 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 HSPB2Q16082 182 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR2AK2Q8NG84 335 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR5M9Q8NGP3 310 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 SMIM19Q96E16 107 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 IKZF5Q9H5V7 419 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 FBXO34Q9NWN3 711 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 A0A096LPE4 126 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 IFITM5A6NNB3 132 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 CFAP161Q6P656 301 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 GLCCI1Q86VQ1 547 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR51A2Q8NGJ7 313 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 EMG1Q92979 244 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 FXYD1O00168 92 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 OR4E1P0C645 316 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 MEOX1P50221 254 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 PCBP4P57723 403 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 ROBO4Q8WZ75 1007 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 LOC107986453A0A1B0GWG9 222 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 XRCC3O43542 346 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 CTSVO60911 334 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 MOSPD3O75425 235 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 SBK3P0C264 359 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 HIST1H1CP16403 213 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 ZP3P21754 424 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 ARRB2P32121 409 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
RAPGEF1-201ENST00000372189 Q6ZRG5 221 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms