RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 JMJD7P0C870 316 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 CPT2P23786 658 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 OR3A2P47893 321 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 TMEM128Q5BJH2 165 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 KCNRGQ8N5I3 272 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 REEP6Q96HR9 211 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 MED9Q9NWA0 146 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 SDHAF2Q9NX18 166 aa25.28■■□□□ 1.64
SSBP3-204ENST00000371320 MRPS18CQ9Y3D5 142 aaKnown RBP25.28■■□□□ 1.64
SSBP3-204ENST00000371320 OR2F2O95006 317 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 HPNP05981 417 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 SNU13P55769 128 aaKnown RBP25.27■■□□□ 1.64
SSBP3-204ENST00000371320 OR2F1Q13607 317 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 GALNTL5Q7Z4T8 443 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 TMEM17Q86X19 198 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 CSNK2A3Q8NEV1 391 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 REG4Q9BYZ8 158 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 MUC3AQ02505 3323 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 PINLYPA6NC86 204 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 DHRS7CA6NNS2 312 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 CEACAM18A8MTB9 384 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 SERPINE3A8MV23 424 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 ACKR3P25106 362 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 MTCP1P56278 107 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 ZNF345Q14585 488 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 PSMF1Q92530 271 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 C5orf66Q9H5L9 145 aa25.27■■□□□ 1.64
SSBP3-204ENST00000371320 EEF1E1-BLOC1S5C9J1V9 151 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 ZNF32P17041 273 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 CLDN15P56746 228 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 TAS2R46P59540 309 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 UBA52P62987 128 aaKnown RBP25.26■■□□□ 1.63
SSBP3-204ENST00000371320 ATXN7L3Q14CW9 347 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-204ENST00000371320 ARL6IP1Q15041 203 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 TMEM185AQ8NFB2 350 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 OR5M9Q8NGP3 310 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 SCGB3A2Q96PL1 93 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 NARFLQ9H6Q4 476 aa25.26■■□□□ 1.63
SSBP3-204ENST00000371320 COL27A1Q8IZC6 1860 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-204ENST00000371320 MFSD2BA6NFX1 497 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 DBX1A6NMT0 343 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 RLN2P04090 185 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 LCATP04180 440 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 PATE4P0C8F1 98 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 TMEM225BP0DP42 221 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 CNR1P21554 472 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 HGFACQ04756 655 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 AKR7LQ8NHP1 331 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 THAP6Q8TBB0 222 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 THOC3Q96J01 351 aaKnown RBP25.25■■□□□ 1.63
SSBP3-204ENST00000371320 VRK1Q99986 396 aaPredicted RBP25.25■■□□□ 1.63
SSBP3-204ENST00000371320 DDA1Q9BW61 102 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 PFDN2Q9UHV9 154 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 KANTRA0A1W2PQU2 76 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 C5orf51A6NDU8 294 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 FPR2P25090 351 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 DLSTP36957 453 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 OR13G1Q8NGZ3 307 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 SUN5Q8TC36 379 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 ST8SIA2Q92186 375 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 SPSB1Q96BD6 273 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 FOXB1Q99853 325 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 TECTAO75443 2155 aa25.25■■□□□ 1.63
SSBP3-204ENST00000371320 NCKAP5O14513 1909 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 C13orf42A0A1B0GVH6 325 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 OR6C6A6NF89 314 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 HTR5AP47898 357 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 CEACAM16Q2WEN9 425 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 FAM209AQ5JX71 171 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 SPINK14Q6IE38 97 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 JMJD6Q6NYC1 403 aaPredicted RBP25.24■■□□□ 1.63
SSBP3-204ENST00000371320 PDZD9Q8IXQ8 264 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 MAFIPQ8WZ33 124 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 LRFN1Q9P244 771 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 TIMM10BQ9Y5J6 103 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 SDCBPO00560 298 aaPredicted RBP25.24■■□□□ 1.63
SSBP3-204ENST00000371320 RIPPLY2Q5TAB7 128 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 ACOT7LQ6ZUV0 252 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 SULF2Q8IWU5 870 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 CPNE4Q96A23 557 aaPredicted RBP25.24■■□□□ 1.63
SSBP3-204ENST00000371320 TMEM230Q96A57 120 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 SPRY4Q9C004 299 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 EHFQ9NZC4 300 aa25.24■■□□□ 1.63
SSBP3-204ENST00000371320 GABRR1P24046 479 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 SERPINF1P36955 418 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 GFRA1P56159 465 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 PSG4Q00888 419 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 FOXO1Q12778 655 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 RTL6Q6ICC9 239 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 LHFPL1Q86WI0 220 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 NECAB3Q96P71 396 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-204ENST00000371320 C1QTNF6Q9BXI9 259 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 NUP50Q9UKX7 468 aa25.23■■□□□ 1.63
SSBP3-204ENST00000371320 BOKQ9UMX3 212 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-204ENST00000371320 C9orf172C9J069 976 aa25.22■■□□□ 1.63
SSBP3-204ENST00000371320 BCL2L11O43521 198 aa25.22■■□□□ 1.63
SSBP3-204ENST00000371320 CYTIPO60759 359 aa25.22■■□□□ 1.63
SSBP3-204ENST00000371320 HTR3BO95264 441 aa25.22■■□□□ 1.63
SSBP3-204ENST00000371320 SIGIRRQ6IA17 410 aa25.22■■□□□ 1.63
SSBP3-204ENST00000371320 ZC3HAV1Q7Z2W4 902 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms