RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 IRF2P14316 349 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ZNF19P17023 458 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ZFP36P26651 326 aaKnown RBP12.65□□□□□ -0.38
SS18L1-202ENST00000370848 LCN2P80188 198 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 RIPPLY1Q0D2K3 151 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 LAIR2Q6ISS4 152 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 MOB3CQ70IA8 216 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 THAP5Q7Z6K1 395 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ZDHHC23Q8IYP9 409 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 RDH10Q8IZV5 341 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 SPICQ8N5J4 248 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 GCSAMQ8N6F7 178 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ZDHHC22Q8N966 263 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 SGMS2Q8NHU3 365 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 RPL3LQ92901 407 aaKnown RBP12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ERGIC1Q969X5 290 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 MICU1Q9BPX6 476 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ISG20L2Q9H9L3 353 aaKnown RBP12.65□□□□□ -0.38
SS18L1-202ENST00000370848 PATZ1Q9HBE1 687 aaKnown RBP12.65□□□□□ -0.38
SS18L1-202ENST00000370848 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 GPR173Q9NS66 373 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 RPL36Q9Y3U8 105 aaKnown RBP12.65□□□□□ -0.38
SS18L1-202ENST00000370848 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 V9GYS6 101 aa12.65□□□□□ -0.38
SS18L1-202ENST00000370848 IGHV3OR15-7A0A075B7D8 119 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 ANXA2P2A6NMY6 339 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 CDIPTO14735 213 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 CCL1P22362 96 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 CPT2P23786 658 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 GPM6AP51674 278 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 ACTG1P63261 375 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 RAB40BQ12829 278 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 KRT74Q7RTS7 529 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 KLHL36Q8N4N3 616 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 LRRC29Q8WV35 223 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 RNF170Q96K19 258 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 RTL8AQ9BWD3 113 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 MRPS18AQ9NVS2 196 aaKnown RBP12.64□□□□□ -0.39
SS18L1-202ENST00000370848 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 ENPP5Q9UJA9 477 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 PCDHGB1Q9Y5G3 927 aa12.64□□□□□ -0.39
SS18L1-202ENST00000370848 LOC107986453A0A1B0GWG9 222 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 E9PI62 339 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 LGALS8O00214 317 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 FOXH1O75593 365 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 FSTL3O95633 263 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
SS18L1-202ENST00000370848 ATP6V1B1P15313 513 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 RPS2P15880 293 aaKnown RBP12.63□□□□□ -0.39
SS18L1-202ENST00000370848 AQP4P55087 323 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 GMFBP60983 142 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 GALEQ14376 348 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 SNCBQ16143 134 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 PLCXD3Q63HM9 321 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 TMEM42Q69YG0 159 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 Q6ZSR3 168 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 DOK3Q7L591 496 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 MUC20Q8N307 709 aaPredicted RBP12.63□□□□□ -0.39
SS18L1-202ENST00000370848 SETD9Q8NE22 299 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 SLC6A7Q99884 636 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 TLNRD1Q9H1K6 362 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 FRRS1LQ9P0K9 344 aa12.63□□□□□ -0.39
SS18L1-202ENST00000370848 ARHGAP32A7KAX9 2087 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 A0A1B0GVI7 797 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF732B4DXR9 585 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 H0YAE9 185 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 SYT7O43581 403 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 MTRF1O75570 445 aaKnown RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 RHBDL1O75783 438 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 LHBP01229 141 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 HTR1AP08908 422 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 WNT2P09544 360 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 LIMS3P0CW19 117 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 LIMS4P0CW20 117 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ACTA2P62736 377 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ACTG2P63267 376 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 C8orf59Q8N0T1 100 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 SCCPDHQ8NBX0 429 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 TFAP2CQ92754 450 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 C7orf69Q9H7B7 122 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms