RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MFFQ9GZY8 342 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 AUNIPQ9H7T9 357 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 CHRNA9Q9UGM1 479 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
LMO4-201ENST00000370542 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 ABCA1O95477 2261 aa12.97□□□□□ -0.33
LMO4-201ENST00000370542 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 KANTRA0A1W2PQU2 76 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 A6NIN4 97 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 OR5H1A6NKK0 313 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SHISA9B4DS77 424 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 E9PI62 339 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 CRLF1O75462 422 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 LYZL6O75951 148 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SLC25A4P12235 298 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SRMP19623 302 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 ACVR1BP36896 505 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 OR12D2P58182 307 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
LMO4-201ENST00000370542 ZMYND11Q15326 602 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
LMO4-201ENST00000370542 FBXW9Q5XUX1 488 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 ZNF613Q6PF04 617 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SKA3Q8IX90 412 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 OR1M1Q8NGA1 313 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 PDCD10Q9BUL8 212 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 FXYD6Q9H0Q3 95 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
LMO4-201ENST00000370542 TRBV2A0A0J9YWF9 115 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 FAM183AA6NL82 134 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 H7C417 338 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 SULT1C2O00338 296 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 IMPA2O14732 288 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 SMAD7O15105 426 aaKnown RBP12.95□□□□□ -0.34
LMO4-201ENST00000370542 ZNF208O43345 1280 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 TACSTD2P09758 323 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 CFPP27918 469 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 PPA1Q15181 289 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 STK11Q15831 433 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 FAM27D1Q5T7N8 215 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 PRSS45Q7RTY3 260 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 DTX3Q8N9I9 347 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 TMEM255BQ8WV15 326 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 SNX33Q8WV41 574 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 TMEM158Q8WZ71 300 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 ST8SIA2Q92186 375 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 ZNF775Q96BV0 537 aaPredicted RBP12.95□□□□□ -0.34
LMO4-201ENST00000370542 TBX5Q99593 518 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 ADAM19Q9H013 955 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 SAV1Q9H4B6 383 aaPredicted RBP12.95□□□□□ -0.34
LMO4-201ENST00000370542 BEX1Q9HBH7 125 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 CA10Q9NS85 328 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 TAS2R3Q9NYW6 316 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 FLVCR2Q9UPI3 526 aa12.95□□□□□ -0.34
LMO4-201ENST00000370542 AK6Q9Y3D8 172 aaKnown RBP12.95□□□□□ -0.34
LMO4-201ENST00000370542 ALPK2Q86TB3 2170 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 F8W036 122 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 H3BUI4 141 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 KDM4BO94953 1096 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 AKAIN1P0CW23 69 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 RAB13P51153 203 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 TAS2R20P59543 309 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 DEFA5Q01523 94 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 CLEC12BQ2HXU8 276 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 ZNF100Q8IYN0 542 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 ZNF563Q8TA94 476 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 SYNPRQ8TBG9 265 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 TNFAIP8L1Q8WVP5 186 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 MUCL1Q96DR8 90 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 BOD1Q96IK1 185 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 MNTQ99583 582 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 SLC25A21Q9BQT8 299 aaPredicted RBP12.94□□□□□ -0.34
LMO4-201ENST00000370542 OR51V1Q9H2C8 321 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 SLCO5A1Q9H2Y9 848 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 C1orf198Q9H425 327 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 SIGLEC7Q9Y286 467 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 NOSIPQ9Y314 301 aaKnown RBP12.94□□□□□ -0.34
LMO4-201ENST00000370542 SLC25A15Q9Y619 301 aa12.94□□□□□ -0.34
LMO4-201ENST00000370542 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 LGALS8O00214 317 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 BCL2L11O43521 198 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 XRCC3O43542 346 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 EIF1BO60739 113 aaKnown RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 RAMP1O60894 148 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 ATG12O94817 140 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 ZNF35P13682 527 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms