RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CEP78Q5JTW2 689 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 BCL2L15Q5TBC7 163 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 TMEM42Q69YG0 159 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 COMMD2Q86X83 199 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ZFAND2BQ8WV99 257 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 RFKQ969G6 155 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 RNF166Q96A37 237 aaPredicted RBP15.72■□□□□ 0.11
CKS1B-203ENST00000368439 TECTBQ96PL2 329 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 RAB3IPQ96QF0 476 aaPredicted RBP15.72■□□□□ 0.11
CKS1B-203ENST00000368439 WDR13Q9H1Z4 485 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 OR51I2Q9H344 312 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ESM1Q9NQ30 184 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 SLC22A13Q9Y226 551 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 PIGLQ9Y2B2 252 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ORC6Q9Y5N6 252 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 METTL15A6NJ78 407 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 DVL1O14640 695 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 SULT1C4O75897 302 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 KRT8P05787 483 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 IGHV4-38-2P0DP08 117 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 GABRB1P18505 474 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 CCL1P22362 96 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 GPM6AP51674 278 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 MICBQ29980 383 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 WDR38Q5JTN6 314 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 STUMQ69YW2 141 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 CATSPERDQ86XM0 798 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 BCL6BQ8N143 479 aaPredicted RBP15.71■□□□□ 0.11
CKS1B-203ENST00000368439 PQLC1Q8N2U9 271 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 FGFRL1Q8N441 504 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 BPIFB2Q8N4F0 458 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.71■□□□□ 0.11
CKS1B-203ENST00000368439 YIPF7Q8N8F6 280 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 OR10H4Q8NGA5 316 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 OR5A2Q8NGI9 324 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 OR14K1Q8NGZ2 314 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 RORBQ92753 470 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 C12orf43Q96C57 262 aaKnown RBP15.71■□□□□ 0.11
CKS1B-203ENST00000368439 CCL13Q99616 98 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 SUCNR1Q9BXA5 334 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 IMPAD1Q9NX62 359 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.71■□□□□ 0.11
CKS1B-203ENST00000368439 ENPP5Q9UJA9 477 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 GTF2A1LQ9UNN4 478 aa15.71■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF732B4DXR9 585 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 P2RY10O00398 339 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 TMPRSS2O15393 492 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 ENSAO43768 121 aaKnown RBP15.7■□□□□ 0.1
CKS1B-203ENST00000368439 MTRF1O75570 445 aaKnown RBP15.7■□□□□ 0.1
CKS1B-203ENST00000368439 RHBDL1O75783 438 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 RPP14O95059 124 aaKnown RBP15.7■□□□□ 0.1
CKS1B-203ENST00000368439 PLATP00750 562 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 FPR2P25090 351 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 GNG3P63215 75 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 ATPAF1Q5TC12 328 aaPredicted RBP15.7■□□□□ 0.1
CKS1B-203ENST00000368439 CD276Q5ZPR3 534 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 KCTD8Q6ZWB6 473 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 MOB3CQ70IA8 216 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 THAP5Q7Z6K1 395 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 ZDHHC22Q8N966 263 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 HIST1H2AAQ96QV6 131 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 C9orf16Q9BUW7 83 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 AASSQ9UDR5 926 aa15.7■□□□□ 0.1
CKS1B-203ENST00000368439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.7■□□□□ 0.1
CKS1B-203ENST00000368439 OR5B21A6NL26 309 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 AKR7A2O43488 359 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 MTNR1AP48039 350 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 TGM4P49221 684 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 FGF12P61328 243 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 C11orf91Q3C1V1 193 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 C9orf139Q6ZV77 190 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 FAM216BQ8N7L0 139 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 OR5T2Q8NGG2 359 aa15.69■□□□□ 0.1
CKS1B-203ENST00000368439 ZNF48Q96MX3 618 aaPredicted RBP15.69■□□□□ 0.1
CKS1B-203ENST00000368439 SOX21Q9Y651 276 aaPredicted RBP15.69■□□□□ 0.1
CKS1B-203ENST00000368439 IGHV3OR16-10A0A075B7F0 116 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 DHRS7CA6NNS2 312 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 NRASP01111 189 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 MMP9P14780 707 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 ATP6V1E1P36543 226 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 GMFBP60983 142 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 TP53I3Q53FA7 332 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 CLVS2Q5SYC1 327 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 PLCXD3Q63HM9 321 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 ZBTB49Q6ZSB9 765 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 BTN2A1Q7KYR7 527 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 DOK3Q7L591 496 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 ENTHD1Q8IYW4 607 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 PRSS35Q8N3Z0 413 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 SIGLECL1Q8N7X8 197 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 ANGPTL6Q8NI99 470 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 AQP3Q92482 292 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 RNFT2Q96EX2 444 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 SNTG1Q9NSN8 517 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 EXOGQ9Y2C4 368 aaKnown RBP15.68■□□□□ 0.1
CKS1B-203ENST00000368439 GMPPBQ9Y5P6 360 aa15.68■□□□□ 0.1
CKS1B-203ENST00000368439 TRAV40A0A0B4J280 105 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 ZNF879B4DU55 563 aa15.67■□□□□ 0.1
CKS1B-203ENST00000368439 DLGAP1O14490 977 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms