RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 DEFB103AP81534 67 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MAT1AQ00266 395 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 CDK3Q00526 305 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 GGTLC2Q14390 218 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 KRT33BQ14525 404 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZMYND11Q15326 602 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF74Q16587 644 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 TRMT12Q53H54 448 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 PRR30Q53SZ7 412 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 TCEAL5Q5H9L2 206 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 DCST2Q5T1A1 773 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MRPL2Q5T653 305 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 HES5Q5TA89 166 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF660Q6AZW8 331 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SLC25A25Q6KCM7 469 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ATRAIDQ6UW56 229 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 NHLRC1Q6VVB1 395 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 FCRLAQ7L513 359 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 VN1R4Q7Z5H5 301 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 HSD17B13Q7Z5P4 300 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 RANBP3LQ86VV4 465 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 PAQR7Q86WK9 346 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SERPINA12Q8IW75 414 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR4N5Q8IXE1 308 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 CDH26Q8IXH8 852 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SLC35F2Q8IXU6 374 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 DND1Q8IYX4 353 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 CDK20Q8IZL9 346 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 EID2Q8N6I1 236 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 KLHDC1Q8N7A1 406 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR2L3Q8NG85 312 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR4K14Q8NGD5 310 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR52E1Q8NGJ3 308 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR5M9Q8NGP3 310 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR10Z1Q8NGY1 313 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR2T27Q8NH04 317 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR51A7Q8NH64 312 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR4C6Q8NH72 309 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 COQ8AQ8NI60 647 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF671Q8TAW3 534 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SYNPRQ8TBG9 265 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 CD99L2Q8TCZ2 262 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 DOK4Q8TEW6 326 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 RGP1Q92546 391 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MARC2Q969Z3 335 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 TM4SF19Q96DZ7 209 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SMIM19Q96E16 107 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZMYND19Q96E35 227 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MRPS24Q96EL2 167 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SGTBQ96EQ0 304 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 S100A16Q96FQ6 103 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SIPA1Q96FS4 1042 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MS4A4EQ96PG1 132 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 DERL3Q96Q80 235 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MAP3K3Q99759 626 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 PDCD1LG2Q9BQ51 273 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF426Q9BUY5 554 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 TTTY10Q9BZA0 68 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 NMNAT2Q9BZQ4 307 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF350Q9GZX5 532 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 SLITRK2Q9H156 845 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 RSPH9Q9H1X1 276 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 TRPV4Q9HBA0 871 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 GPN1Q9HCN4 374 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MRPS30Q9NP92 439 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 IFT46Q9NQC8 304 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 EXOSC3Q9NQT5 275 aaKnown RBP2.88□□□□□ -1.95
PTPRK-202ENST00000368205 KLK11Q9UBX7 282 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 OR5V1Q9UGF6 321 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 CHRNA9Q9UGM1 479 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 COPS3Q9UNS2 423 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 MED31Q9Y3C7 131 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 WDR45Q9Y484 360 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF780BQ9Y6R6 833 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 V9GY05 133 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 LTBP2Q14767 1821 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 DNAH12Q6ZR08 3092 aa2.88□□□□□ -1.95
PTPRK-202ENST00000368205 NUMA1Q14980 2115 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 IGHV4-30-2A0A087WSY4 118 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 A0A087WV48 116 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 TRAV14DV4A0A0A6YYC5 116 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 A0A0B4J2E0 115 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 TRBV2A0A0J9YWF9 115 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 TRBV5-5A0A0J9YX44 114 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 A0A1B0GWA3 101 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 A0A1B0GX12 115 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 D6RAR5 112 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 H7C417 338 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 AIPO00170 330 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 IMPA2O14732 288 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 NUPL2O15504 423 aaKnown RBP2.87□□□□□ -1.95
PTPRK-202ENST00000368205 LATO43561 262 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 CREBL2O60519 120 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-202ENST00000368205 EIF4E2O60573 245 aaKnown RBP2.87□□□□□ -1.95
PTPRK-202ENST00000368205 SELENOFO60613 162 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 CTNSO60931 367 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 ZNF254O75437 659 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 UPK3AO75631 287 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 AQP8O94778 261 aa2.87□□□□□ -1.95
PTPRK-202ENST00000368205 NDUFB2O95178 105 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms