RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 METTL8Q9H825 291 aaKnown RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 MMP26Q9NRE1 261 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 EDARQ9UNE0 448 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 SZT2Q5T011 3432 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 IGHV1-45A0A0A0MS14 117 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 F5H5K5 113 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 M0R135 149 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 ADAP1O75689 374 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 TSPAN9O75954 239 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 CSTBP04080 98 aaKnown RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 MRPS34P82930 218 aaKnown RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 PDSS1Q5T2R2 415 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 C1QL2Q7Z5L3 287 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 PAQR8Q8TEZ7 354 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 ZNF799Q96GE5 643 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 LIN37Q96GY3 246 aaPredicted RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 IMMP1LQ96LU5 166 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
CD48-201ENST00000368045 PIGLQ9Y2B2 252 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 CEP192Q8TEP8 1941 aa12.52□□□□□ -0.4
CD48-201ENST00000368045 OR5H15A6NDH6 313 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 GJE1A6NN92 205 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 YKT6O15498 198 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 IFNA2P01563 188 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 FAHP16930 419 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 RSPO1Q2MKA7 263 aaPredicted RBP12.52□□□□□ -0.41
CD48-201ENST00000368045 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 C10orf91Q5T1B1 145 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
CD48-201ENST00000368045 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
CD48-201ENST00000368045 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 C1orf123Q9NWV4 160 aa12.52□□□□□ -0.41
CD48-201ENST00000368045 PURGQ9UJV8 347 aaKnown RBP12.52□□□□□ -0.41
CD48-201ENST00000368045 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
CD48-201ENST00000368045 C5orf63A6NC05 138 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 NUPL2O15504 423 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 ZIC3O60481 467 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 HTR3BO95264 441 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 CD63P08962 238 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 SERPINA2P20848 420 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 GLRA1P23415 457 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RBMXP38159 391 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 SSR4P51571 173 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RAC1P63000 192 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 FAM27BQ5VT28 67 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RAET1LQ5VY80 246 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 Q96M66 194 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 OCIAD1Q9NX40 245 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 OR5AC2Q9NZP5 309 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 DKKL1Q9UK85 242 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 KLK3P07288 261 aaPredicted RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 FAM157CP0CG43 387 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 COX6A1P12074 109 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 PI3P19957 117 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 IL32P24001 234 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RAB32Q13637 225 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RAB35Q15286 201 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 SULF2Q8IWU5 870 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 ADAMTS17Q8TE56 1095 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 NPRL2Q8WTW4 380 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 OR10C1Q96KK4 312 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 PIGQQ9BRB3 760 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 LPAR3Q9UBY5 353 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 HSF4Q9ULV5 492 aa12.51□□□□□ -0.41
CD48-201ENST00000368045 PHF3Q92576 2039 aaKnown RBP12.51□□□□□ -0.41
CD48-201ENST00000368045 ARID1BQ8NFD5 2236 aaPredicted RBP12.5□□□□□ -0.41
CD48-201ENST00000368045 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 TMEM265A0A087WTH1 108 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 C9J4A7 227 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 SERPINA5P05154 406 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 UMODP07911 640 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 CCL3P10147 92 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 DTYMKP23919 212 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms