RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 UBQLN3Q9H347 655 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 TAF9BQ9HBM6 251 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 SIX2Q9NPC8 291 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MED17Q9NVC6 651 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MED9Q9NWA0 146 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 KLK4Q9Y5K2 254 aa7.8□□□□□ -1.16
SYNE1-206ENST00000367253 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 HSD17B6O14756 317 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 STARD6P59095 220 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CD300CQ08708 224 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 IAH1Q2TAA2 248 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM177Q53S58 311 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CYHR1Q6ZMK1 362 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF66Q6ZN08 573 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CBLN2Q8IUK8 224 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 LAX1Q8IWV1 398 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ADGRG5Q8IZF4 528 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MFSD4AQ8N468 514 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DTWD1Q8N5C7 304 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 BMPERQ8N8U9 685 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR52L2PQ8NGH6 319 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR56B1Q8NGI3 324 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR1J1Q8NGS3 322 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 FOXH1O75593 365 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR2F2O95006 317 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CLDN1O95832 211 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR5G3P0C626 314 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 LGALS7P47929 136 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 KLF3P57682 345 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR2F1Q13607 317 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 EDDM3AQ14507 147 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 RPEL1Q2QD12 228 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF691Q5VV52 312 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SERPINA11Q86U17 422 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 FER1L6Q2WGJ9 1857 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 A0A1W2PNV4 684 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 H3BVH4 76 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 GABRPO00591 440 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SUSD5O60279 629 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CD1DP15813 335 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 BLVRBP30043 206 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SELENOWP63302 87 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CRMP1Q14194 572 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CLEC12BQ2HXU8 276 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF362Q5T0B9 420 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CPZQ66K79 652 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 NUFIP2Q7Z417 695 aaKnown RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CYB561A3Q8NBI2 242 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR13F1Q8NGS4 319 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 IL1F10Q8WWZ1 152 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ASB17Q8WXJ9 295 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DVL3Q92997 716 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF778Q96MU6 729 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 NSUN5Q96P11 429 aaKnown RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DDOQ99489 341 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SLC25A21Q9BQT8 299 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 C1QTNF6Q9BXI9 259 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 C1QTNF3Q9BXJ4 246 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 C1QTNF2Q9BXJ5 285 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 OR51I2Q9H344 312 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 LTBP1Q14766 1721 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MYO10Q9HD67 2058 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 GFYI3L273 518 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DCTN6O00399 190 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CHEK1O14757 476 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 SLC16A7O60669 478 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 CA2P00918 260 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 TGFAP01135 160 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 KLKB1P03952 638 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 FAM87AP0C7U9 286 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF83P51522 516 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DSCR4P56555 118 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 HBA1P69905 142 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF91Q05481 1191 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 RHBDD2Q6NTF9 364 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 B3GNT8Q7Z7M8 397 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM174Q8WUU8 243 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 RPL3LQ92901 407 aaKnown RBP7.79□□□□□ -1.16
SYNE1-206ENST00000367253 MARCH5Q9NX47 278 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 PLA2G3Q9NZ20 509 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 TINAGQ9UJW2 476 aa7.79□□□□□ -1.16
SYNE1-206ENST00000367253 DVL1O14640 695 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 HS3ST1O14792 307 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SH2D1BO14796 132 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 TAAR5O14804 337 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 DVL1P1P54792 670 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 FAM53BQ14153 422 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 DEFB121Q5J5C9 76 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SLC35D2Q76EJ3 337 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 OR8G5Q8NG78 346 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 OR1S2Q8NGQ3 325 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms