RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NUFIP1Q9UHK0 495 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 KPTNQ9Y664 436 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMEM14AQ9Y6G1 99 aa11.27□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PSMD9O00233 223 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 AKR7A2O43488 359 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RHBDL1O75783 438 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IGHV1-69P01742 117 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MELTFP08582 738 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MRPL3P09001 348 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MAP2K3P46734 347 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IL13RA1P78552 427 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 LCN1P1Q5VSP4 162 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NXNL2Q5VZ03 156 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 METAP1DQ6UB28 335 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SHISA2Q6UWI4 295 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 Q6ZSR3 168 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SLC36A1Q7Z2H8 476 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR5T2Q8NGG2 359 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GATAD2BQ8WXI9 593 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ADGRL4Q9HBW9 690 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 KRT84Q9NSB2 600 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ACOXLQ9NUZ1 547 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 KIF17Q9P2E2 1029 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
TNFRSF1A-202ENST00000366159 G3V2T6 193 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 M0R129 80 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TTRP02766 147 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ACAA1P09110 424 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SELLP14151 372 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GPM6AP51674 278 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MFGE8Q08431 387 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZBTB37Q5TC79 503 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMEM42Q69YG0 159 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 KIR3DL3Q8N743 410 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 Q8N7P7 452 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TCEANCQ8N8B7 351 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR5A2Q8NGI9 324 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMEM163Q8TC26 289 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR51E1Q8TCB6 317 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 LHX4Q969G2 390 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TMIGD2Q96BF3 282 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FAM71F1Q96KD3 344 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CNN2Q99439 309 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 UNKLQ9H9P5 680 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GPR84Q9NQS5 396 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF222Q9UK12 451 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 POMT1Q9Y6A1 747 aa11.25□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IGKV1D-17A0A075B6S4 117 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SLC22A31A6NKX4 558 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SPRY1O43609 319 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NDUFB3O43676 98 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TFF1P04155 84 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 FASP25445 335 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CAV3P56539 151 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 GNG3P63215 75 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RELBQ01201 579 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DGUOKQ16854 277 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 C1orf122Q6ZSJ8 110 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 AQP3Q92482 292 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 TNFRSF14Q92956 283 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MED30Q96HR3 178 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MNTQ99583 582 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 APOL4Q9BPW4 351 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PRRG3Q9BZD7 231 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CHIAQ9BZP6 476 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SLITRK2Q9H156 845 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 SNTG1Q9NSN8 517 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 NLKQ9UBE8 527 aa11.24□□□□□ -0.61
TNFRSF1A-202ENST00000366159 VWFP04275 2813 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 A0A0U1RQK1 487 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR5B21A6NL26 309 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 OR2AT4A6NND4 320 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ZNF732B4DXR9 585 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MAGEB4O15481 346 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 DHRS3O75911 302 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 ATP5HO75947 161 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 PSG2P11465 335 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 MDKP21741 143 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 POLR2IP36954 125 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 IER3P46695 156 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RASSF2P50749 326 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 CXCR4P61073 352 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 EGR3Q06889 387 aa11.23□□□□□ -0.61
TNFRSF1A-202ENST00000366159 RIPPLY1Q0D2K3 151 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms