RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 C12orf54Q6X4T0 127 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 AMN1Q8IY45 258 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SDR9C7Q8NEX9 313 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ORAOV1Q8WV07 137 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ECHDC3Q96DC8 303 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 DTNBP1Q96EV8 351 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PRRC1Q96M27 445 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 C16orf45Q96MC5 204 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 DERL3Q96Q80 235 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SLC29A1Q99808 456 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 THTPAQ9BU02 230 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 MRM3Q9HC36 420 aaKnown RBP0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 DDX18Q9NVP1 670 aaKnown RBP0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HPF1Q9NWY4 346 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 DOK5Q9P104 306 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PSMC3IPQ9P2W1 217 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 FBXL3Q9UKT7 428 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 STARD10Q9Y365 291 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 LOXHD1Q8IVV2 1947 aa0.08□□□□□ -2.4
RNU6-1048P-201ENST00000364054 BRCA1P38398 1863 aaKnown RBP0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 IGKV1D-37A0A075B6S9 117 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 IGHV3-21A0A0B4J1V1 117 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CCL15-CCL14A0A0B4J2E2 113 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 A0A1B0GTI1 187 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ZNF729A6NN14 1252 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 F5H5T6 163 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SIRPB1O00241 398 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HCRTO43612 131 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ZNF189O75820 626 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 LSM8O95777 96 aaKnown RBP0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TSPAN13O95857 204 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RRM2P31350 389 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CFHR2P36980 270 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SLC1A2P43004 574 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PPICP45877 212 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ELP6Q0PNE2 266 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TRAM2Q15035 370 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ELOCQ15369 112 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PPP1R7Q15435 360 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CCL15Q16663 113 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 DEFB115Q30KQ5 88 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CCDC152Q4G0S7 254 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PMF1Q6P1K2 205 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TCF23Q7RTU1 214 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SLC22A9Q8IVM8 553 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 MSRB3Q8IXL7 192 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ZDHHC22Q8N966 263 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 WDR31Q8NA23 367 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 OR4C16Q8NGL9 310 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 OR5H2Q8NGV7 314 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PYURFQ96I23 114 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RNF170Q96K19 258 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 GPR21Q99679 349 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ZNF780BQ9Y6R6 833 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ADAMTS7Q9UKP4 1686 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ADGRB3O60242 1522 aa0.07□□□□□ -2.4
RNU6-1048P-201ENST00000364054 M0R3G1 203 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ETHE1O95571 254 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 OR4Q2P0C623 313 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HLA-GP17693 338 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 GGT2P36268 569 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 MAGEA12P43365 314 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RPL23AP62750 156 aaKnown RBP0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 BCL2A1Q16548 175 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 NIPA1Q7RTP0 329 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 VN1R4Q7Z5H5 301 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ITPRIPQ8IWB1 547 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HS3ST5Q8IZT8 346 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 BHLHE23Q8NDY6 225 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 NUBPLQ8TB37 319 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RNF133Q8WVZ7 376 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ISG20Q96AZ6 181 aaKnown RBP0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CALN1Q9BXU9 219 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ROPN1BQ9BZX4 212 aaPredicted RBP0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TXNIPQ9H3M7 391 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 MFSD1Q9H3U5 465 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TREX1Q9NSU2 369 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 BABAM2Q9NXR7 383 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HSPE1-MOB4S4R3N1 261 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 COL4A2P08572 1712 aa0.06□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RGS12O14924 1447 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PTPRKQ15262 1439 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 IGKV1-9A0A0C4DH69 117 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 A0A1W2PRG6 482 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TSPAN11A1L157 253 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 FNDC10F2Z333 226 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 ANXA5P08758 320 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 SEC11BP0C7V7 166 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 PGA5P0DJD9 388 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 CSNK2A2P19784 350 aaPredicted RBP0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RAB4AP20338 218 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 USF1P22415 310 aaPredicted RBP0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 TEAD1P28347 426 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 MYCNOSP40205 109 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RAB7AP51149 207 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 GRB2P62993 217 aaKnown RBP0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 FAM201AQ5SY85 155 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RWDD4Q6NW29 188 aaKnown RBP0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 RGS9BPQ6ZS82 235 aa0.05□□□□□ -2.4
RNU6-1048P-201ENST00000364054 HORMAD1Q86X24 394 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms