RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SYT7O43581 403 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 SPRY2O43597 315 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 CD8AP01732 235 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 OPN1LWP04000 364 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 RPA2P15927 270 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 CLVS2Q5SYC1 327 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 HDDC2Q7Z4H3 204 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 BPIFB2Q8N4F0 458 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 SLC22A24Q8N4F4 322 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 C12orf45Q8N5I9 185 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-202ENST00000360642 ACBD4Q8NC06 268 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM116Q8NCL8 245 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 OR5D14Q8NGL3 314 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 OR6X1Q8NH79 312 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 SAP25Q8TEE9 199 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 DHRS9Q9BPW9 319 aa6.4□□□□□ -1.38
CLCN3-202ENST00000360642 PNRC2Q9NPJ4 139 aaKnown RBP6.4□□□□□ -1.38
CLCN3-202ENST00000360642 SLC25A10Q9UBX3 287 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM14DPA8MWL7 114 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 IGHG1P01857 330 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 CYC1P08574 325 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 ARPC4P59998 168 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 DHRS2Q13268 280 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 MEF2DQ14814 521 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 FJX1Q86VR8 437 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 OR4S1Q8NGB4 309 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 SLC22A8Q8TCC7 542 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 ELP5Q8TE02 316 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 SPACA9Q96E40 222 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-202ENST00000360642 RASL10BQ96S79 203 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 B3GNT4Q9C0J1 378 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 METTL7AQ9H8H3 244 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 MOB1AQ9H8S9 216 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 KCNN3Q9UGI6 736 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 VSIG4Q9Y279 399 aa6.4□□□□□ -1.39
CLCN3-202ENST00000360642 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF878C9JN71 531 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 RP2O75695 350 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 NMBP08949 121 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF17P17021 662 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 RAB3AP20336 220 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 MPGP29372 298 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 GMFBP60983 142 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 TCF15Q12870 199 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CHMP1BQ7LBR1 199 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 GPAT4Q86UL3 456 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF584Q8IVC4 421 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 OR6K3Q8NGY3 331 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 SUN5Q8TC36 379 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 SCARB1Q8WTV0 552 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 RBPMSQ93062 196 aaKnown RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 FAM46BQ96A09 425 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CMBLQ96DG6 245 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 OXGR1Q96P68 337 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 OPA3Q9H6K4 179 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 AKIRIN1Q9H9L7 192 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 NUP50Q9UKX7 468 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CHCHD2Q9Y6H1 151 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 PHF3Q92576 2039 aaKnown RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 FXYD6-FXYD2A0A087WZ82 144 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 LOC102723996A0A087X1L8 192 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 DISC1C4P0D8 188 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 RAMP1O60894 148 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 IL6RP08887 468 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 HLA-GP17693 338 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CCL1P22362 96 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ANOS1P23352 680 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 FKBP2P26885 142 aaKnown RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CDAP32320 146 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 SORDQ00796 357 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZMYND11Q15326 602 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CDNFQ49AH0 187 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM65Q6PI78 240 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 GSG1LQ6UXU4 331 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 TRAPPC6BQ86SZ2 158 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 SLC25A42Q86VD7 318 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 OR5M8Q8NGP6 311 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 OR51E1Q8TCB6 317 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 CYYR1Q96J86 154 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 C1orf147Q96MC9 270 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 PRRT1Q99946 306 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ARL6Q9H0F7 186 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 FXYD6Q9H0Q3 95 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 PRO3102Q9H379 93 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM185BQ9H7F4 350 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 PLA2G3Q9NZ20 509 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 C19orf25Q9UFG5 118 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 FARSAQ9Y285 508 aaKnown RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 HDGFL3Q9Y3E1 203 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 RTTNQ86VV8 2226 aa6.39□□□□□ -1.39
CLCN3-202ENST00000360642 TNRC18O15417 2968 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-202ENST00000360642 ZSCAN5BA6NJL1 495 aa6.38□□□□□ -1.39
CLCN3-202ENST00000360642 SMAD9O15198 467 aaKnown RBP6.38□□□□□ -1.39
CLCN3-202ENST00000360642 SCGNO76038 276 aa6.38□□□□□ -1.39
CLCN3-202ENST00000360642 DCNP07585 359 aaKnown RBP6.38□□□□□ -1.39
CLCN3-202ENST00000360642 GCSHP23434 173 aa6.38□□□□□ -1.39
CLCN3-202ENST00000360642 ZBTB25P24278 435 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms