RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FAM57BQ71RH2 274 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 TUSC5Q8IXB3 177 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 THAP6Q8TBB0 222 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 WNT2BQ93097 391 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 FGGYQ96C11 551 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 ADAT3Q96EY9 351 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 FAM71F1Q96KD3 344 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 CALHM2Q9HA72 323 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 MRPL15Q9P015 296 aaKnown RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 TLN1Q9Y490 2541 aaKnown RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 EFSO43281 561 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SLC19A2O60779 497 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 HPNP05981 417 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ABOP16442 354 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 MSR1P21757 451 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 MAPK3P27361 379 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CX3CR1P49238 355 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CCR9P51686 369 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 HLXQ14774 488 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ST3GAL2Q16842 350 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ABLIM2Q6H8Q1 611 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ABHD12BQ7Z5M8 362 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 BIVMQ86UB2 503 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 MISP3Q96FF7 219 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ABCG5Q9H222 651 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 NELFAQ9H3P2 528 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 EXO5Q9H790 373 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 HCKP08631 526 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CALCRP30988 508 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 GNALP38405 381 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 PITPNBP48739 271 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 C20orf196Q8IYI0 205 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SPAG16Q8N0X2 631 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SVBPQ8N300 66 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF283Q8N7M2 679 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SYNPRQ8TBG9 265 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ZFP57Q9NU63 452 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 HHLA2Q9UM44 414 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SPTA1P02549 2419 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 GLSO94925 669 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 CD46P15529 392 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF708P17019 499 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 TNFSF10P50591 281 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 TSPO2Q5TGU0 170 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 REC114Q7Z4M0 266 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 RELL2Q8NC24 303 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 BEX1Q9HBH7 125 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 PLEK2Q9NYT0 353 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 SPRR3Q9UBC9 169 aa11.08□□□□□ -0.64
GGPS1-202ENST00000358966 KLF13Q9Y2Y9 288 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-202ENST00000358966 A0A096LPE4 126 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 A0A1W2PPZ6 126 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 CXorf65A6NEN9 183 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 SYT7O43581 403 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 MED6O75586 246 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 RP2O75695 350 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM11P17152 192 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 CSRP1P21291 193 aaKnown RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 BTCP35070 178 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 RBP2P50120 134 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 MMP16P51512 607 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 CLINT1Q14677 625 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 RSPO1Q2MKA7 263 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 OPA3Q9H6K4 179 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 GPR84Q9NQS5 396 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 LUZP4Q9P127 313 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 WASF3Q9UPY6 502 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 KALRNO60229 2985 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 A0A1W2PPE3 182 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 NFYAP23511 347 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 CD82P27701 267 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 SOX8P57073 446 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 PSMA6P60900 246 aaKnown RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 HGFACQ04756 655 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 GLYATL3Q5SZD4 288 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF774Q6NX45 483 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 UNQ6494/PRO21346Q6UXR6 183 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 PGAP1Q75T13 922 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM17Q86X19 198 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF383Q8NA42 475 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 ZFP62Q8NB50 900 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 PXT1Q8NFP0 134 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 OR5M9Q8NGP3 310 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms