RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SSX1Q16384 188 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF468Q5VIY5 522 aaPredicted RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 Q7L0L9 218 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 FAM58AQ8N1B3 248 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 OR51I2Q9H344 312 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF107Q9UII5 783 aaPredicted RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 TRBV5-3A0A0A0MS03 114 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 ZIC2O95409 532 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-202ENST00000357250 EDN3P14138 238 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-202ENST00000357250 RPA2P15927 270 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 FAHP16930 419 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 MDH2P40926 338 aaKnown RBP10.52□□□□□ -0.72
COL9A1-202ENST00000357250 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-202ENST00000357250 SLC16A12Q6ZSM3 486 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 VN1R4Q7Z5H5 301 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 OR10X1Q8NGY0 326 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 NUBPLQ8TB37 319 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 SIRT3Q9NTG7 399 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-202ENST00000357250 UFSP2Q9NUQ7 469 aa10.52□□□□□ -0.72
COL9A1-202ENST00000357250 IGHV1OR21-1A0A087WYE8 117 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 FBP1P09467 338 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 SULT1A3P0DMM9 295 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 SULT1A4P0DMN0 295 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 CCL7P80098 99 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 NUFIP2Q7Z417 695 aaKnown RBP10.52□□□□□ -0.73
COL9A1-202ENST00000357250 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 EXTL1Q92935 676 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 PRRX2Q99811 253 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 FAAP20Q6NZ36 180 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 SPP1P10451 314 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.73
COL9A1-202ENST00000357250 HLA-BQ31612 363 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 RGS7BPQ6MZT1 257 aaPredicted RBP10.52□□□□□ -0.73
COL9A1-202ENST00000357250 LCN15Q6UWW0 184 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF547Q8IVP9 402 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 SLC39A7Q92504 469 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 C10orf35Q96D05 121 aa10.52□□□□□ -0.73
COL9A1-202ENST00000357250 DCTN6O00399 190 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 TNFSF15O95150 251 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 TIAL1Q01085 375 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL9A1-202ENST00000357250 RNF212Q495C1 297 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 MRM1Q6IN84 353 aaKnown RBP10.51□□□□□ -0.73
COL9A1-202ENST00000357250 OR4F5Q8NH21 305 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 KISS1RQ969F8 398 aaPredicted RBP10.51□□□□□ -0.73
COL9A1-202ENST00000357250 OR4F4Q96R69 305 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 ING1Q9UK53 422 aaPredicted RBP10.51□□□□□ -0.73
COL9A1-202ENST00000357250 A0A096LPE4 126 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 A0A1W2PPZ6 126 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
COL9A1-202ENST00000357250 AANATQ16613 207 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 TRILQ7L0X0 811 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 AMER3Q8N944 861 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 DHRS9Q9BPW9 319 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 PCM1Q15154 2024 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 CLEC18AA5D8T8 446 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 HMSDA8MTL9 139 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 DRD3P35462 400 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF90Q03938 601 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 KISS1Q15726 138 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 HAGHQ16775 308 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 LSMEM1Q8N8F7 131 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 CLEC18CQ8NCF0 446 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 CABLES2Q9BTV7 478 aa10.51□□□□□ -0.73
COL9A1-202ENST00000357250 PRSS44E7EML9 344 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 PI3P19957 117 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 SRD5A2P31213 254 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 GSG1Q2KHT4 349 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF275Q9NSD4 429 aaPredicted RBP10.5□□□□□ -0.73
COL9A1-202ENST00000357250 SCN3AQ9NY46 2000 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 TRGV10A0A0A0MS01 117 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 SFT2D2O95562 160 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 PTGFRP43088 359 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 DMKNQ6E0U4 476 aaPredicted RBP10.5□□□□□ -0.73
COL9A1-202ENST00000357250 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OR4D9Q8NGE8 314 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 UCK1Q9HA47 277 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 FN3KRPQ9HA64 309 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 TRGV5A0A0B4J1U4 118 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 TO15178 435 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OGG1O15527 345 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 MOSPD3O75425 235 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 CPN1P15169 458 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 COL9A1P20849 921 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 ZP3P21754 424 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 NXPH1P58417 271 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 EIF4EBP2Q13542 120 aaPredicted RBP10.5□□□□□ -0.73
COL9A1-202ENST00000357250 ANKRD37Q7Z713 158 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 ADPRHL1Q8NDY3 354 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OR8U1Q8NH10 309 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms