RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TNFSF13O75888 250 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 APOA1P02647 267 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ERCC1P07992 297 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 CALCBP10092 127 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SRMP19623 302 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 HSD11B1P28845 292 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 NR4A2P43354 598 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 STARP49675 285 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 HCCSP53701 268 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SRSF2Q01130 221 aaKnown RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 FAM27E3Q08E93 113 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ENDOGQ14249 297 aaKnown RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 GUSBP1Q15486 140 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF181Q2M3W8 571 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SLC36A2Q495M3 483 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ELFN2Q5R3F8 820 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 HACD4Q5VWC8 232 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 OR7E24Q6IFN5 339 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 DRAM2Q6UX65 266 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 Q6ZPA2 131 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 WDFY1Q8IWB7 410 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 GCNT2Q8N0V5 402 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 PRSS35Q8N3Z0 413 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 PARP16Q8N5Y8 322 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF611Q8N823 705 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 GDPD1Q8N9F7 314 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 C1orf162Q8NEQ5 155 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 OR10S1Q8NGN2 331 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 FNDC9Q8TBE3 224 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SETD6Q8TBK2 473 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 DEDD2Q8WXF8 326 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 HSD17B8Q92506 261 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 RGP1Q92546 391 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SPTSSAQ969W0 71 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM106AQ96A25 262 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 DNAJA3Q96EY1 480 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 DCLRE1CQ96SD1 692 aaKnown RBP5.99□□□□□ -1.45
VPS13A-201ENST00000355766 AMELYQ99218 206 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ATF6BQ99941 703 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 PDCD1LG2Q9BQ51 273 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF416Q9BWM5 594 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 OPA3Q9H6K4 179 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 CRLF2Q9HC73 371 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 GPR35Q9HC97 309 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 TCF7L1Q9HCS4 588 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 G6PC2Q9NQR9 355 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SLC17A5Q9NRA2 495 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 OR52A1Q9UKL2 312 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 DHDHQ9UQ10 334 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 GRIP1Q9Y3R0 1128 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 TIMM10BQ9Y5J6 103 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 SVEP1Q4LDE5 3571 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 NCKAP5O14513 1909 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 IGHV3-15A0A0B4J1V0 119 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 A0A0G2JK05 382 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 LOC107986453A0A1B0GWG9 222 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 IFITM5A6NNB3 132 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 H0YC42 278 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 HS3ST1O14792 307 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 MTRF1O75570 445 aaKnown RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 IGLV3-1P01715 115 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 OPN1LWP04000 364 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 PSKH1P11801 424 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 AGTR1P30556 359 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 ARR3P36575 388 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 TGFBR1P36897 503 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 TALDO1P37837 337 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 MNDAP41218 407 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 KIR3DL2P43630 455 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 OR3A2P47893 321 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 MECP2P51608 486 aaKnown RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 MRPS10P82664 201 aaKnown RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 TGFBR3Q03167 851 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 TAF13Q15543 124 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 FAM189A2Q15884 450 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 RGS21Q2M5E4 152 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 BEX5Q5H9J7 111 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 CARD17Q5XLA6 110 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF529Q6P280 563 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 C16orf87Q6PH81 154 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 CFAP77Q6ZQR2 320 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 DNM1P46Q6ZS02 220 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 PGAP1Q75T13 922 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 DOK3Q7L591 496 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 SSX8Q7RTT4 187 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 SLC22A24Q8N4F4 322 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 OR5AN1Q8NGI8 311 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 OR6K3Q8NGY3 331 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 SMAP2Q8WU79 429 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 GCDHQ92947 438 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 PTX4Q96A99 478 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 CPNE2Q96FN4 548 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF845Q96IR2 970 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 TECTBQ96PL2 329 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 ALKBH3Q96Q83 286 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-201ENST00000355766 UQCC2Q9BRT2 126 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 BEX2Q9BXY8 128 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 PRRG4Q9BZD6 226 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 RNF167Q9H6Y7 350 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms