RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 F12P00748 615 aaPredicted RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 TPT1P13693 172 aaKnown RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF169Q14929 603 aaPredicted RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 BAP18Q8IXM2 172 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 C20orf196Q8IYI0 205 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 PHYHIPLQ96FC7 376 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 NMES1Q9C002 83 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 WNT16Q9UBV4 365 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 DNASE2O00115 360 aaPredicted RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 TOR1AO14656 332 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 DHHO43323 396 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 DHRS3O75911 302 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 GLI4P10075 376 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 CCL1P22362 96 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 FPR2P25090 351 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 RRADP55042 308 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF468Q5VIY5 522 aaPredicted RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 BATF2Q8N1L9 274 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 IFI44Q8TCB0 444 aa17.14■□□□□ 0.33
COL13A1-201ENST00000354547 NKX6-2Q9C056 277 aaPredicted RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 MCTS1Q9ULC4 181 aaKnown RBP17.14■□□□□ 0.33
COL13A1-201ENST00000354547 SERPINA5P05154 406 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 CYCSP99999 105 aaKnown RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 PNLIPRP3Q17RR3 467 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 PLEKHN1Q494U1 663 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 FBXO17Q96EF6 278 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 DNTTIP1Q9H147 329 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 SIT1Q9Y3P8 196 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 TEX13DA0A0J9YY54 714 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 F10P00742 488 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 KLK3P07288 261 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 NAT1P18440 290 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 OPRM1P35372 400 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 MTCP1P56278 107 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 KCNMB1Q16558 191 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 TAF9Q16594 264 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 GUCA2BQ16661 112 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 ACTBL2Q562R1 376 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 YRDCQ86U90 279 aaKnown RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 OR9K2Q8NGE7 335 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 PIGQQ9BRB3 760 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 NUDT16L1Q9BRJ7 211 aaKnown RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 PIGMQ9H3S5 423 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 A0A0J9YW62 118 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 FAM221AA4D161 298 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 DHRS7CA6NNS2 312 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 ACTL6AO96019 429 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 UMODP07911 640 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 DYRK2Q92630 601 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 CPNE2Q96FN4 548 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-201ENST00000354547 SLC6A15Q9H2J7 730 aa17.13■□□□□ 0.33
COL13A1-201ENST00000354547 ZDBF2Q9HCK1 2354 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ABCD4O14678 606 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 TNRC18O15417 2968 aaPredicted RBP17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ZNHIT1O43257 154 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ZIC3O60481 467 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ADH6P28332 368 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 H3F3AP84243 136 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 PDCD1Q15116 288 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 CCDC36Q8IYA8 594 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 NABP1Q96AH0 204 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 HRH4Q9H3N8 390 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 CYTL1Q9NRR1 136 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF705EA8MWA4 302 aaPredicted RBP17.12■□□□□ 0.33
COL13A1-201ENST00000354547 PATE3B3GLJ2 98 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
COL13A1-201ENST00000354547 OPN5Q6U736 354 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF2Q9BSG1 426 aaPredicted RBP17.12■□□□□ 0.33
COL13A1-201ENST00000354547 FAAP24Q9BTP7 215 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 TREM1Q9NP99 234 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 OSGIN2Q9Y236 505 aa17.12■□□□□ 0.33
COL13A1-201ENST00000354547 IGHV1-45A0A0A0MS14 117 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 CD63P08962 238 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 PRF1P14222 555 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 SSC4DQ8WTU2 575 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 TOMM40LQ969M1 308 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 SRXN1Q9BYN0 137 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 RAB18Q9NP72 206 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 AHCTF1Q8WYP5 2266 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 LIFP15018 202 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 ACKR3P25106 362 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 TAS2R46P59540 309 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 FAM89BQ8N5H3 189 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 SEMA6DQ8NFY4 1073 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
COL13A1-201ENST00000354547 C14orf166Q9Y224 244 aaKnown RBP17.11■□□□□ 0.33
COL13A1-201ENST00000354547 SSR4P51571 173 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 ZNF774Q6NX45 483 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 FAM122CQ6P4D5 195 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 Q7L0L9 218 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 AKR7LQ8NHP1 331 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SGK3Q96BR1 496 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SCGB3A2Q96PL1 93 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 ALKBH3Q96Q83 286 aaPredicted RBP17.1■□□□□ 0.33
COL13A1-201ENST00000354547 SMIM3Q9BZL3 60 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 FAM96BQ9Y3D0 163 aa17.1■□□□□ 0.33
COL13A1-201ENST00000354547 HS3ST3B1Q9Y662 390 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms