RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SUCLG1P53597 346 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 PNLIPRP2P54317 469 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TMEM97Q5BJF2 176 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 WBP2NLQ6ICG8 309 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 FAM71E1Q6IPT2 247 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 PWWP2BQ6NUJ5 590 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 CLEC2AQ6UVW9 174 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MRGPRGQ86SM5 289 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 KLHDC8AQ8IYD2 350 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 OR5A2Q8NGI9 324 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 BLNKQ8WV28 456 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TNFRSF13CQ96RJ3 184 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 NMNAT3Q96T66 252 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 NKX3-1Q99801 234 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 RNF122Q9H9V4 155 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 LAMB2P55268 1798 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 HMGN4O00479 90 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TCN2P20062 427 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 HOXA6P31267 233 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 GDF6Q6KF10 455 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 LRRC18Q8N456 261 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 GPR32P1Q8NGA4 272 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ZCCHC14Q8WYQ9 949 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 KTI12Q96EK9 354 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 SOX7Q9BT81 388 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 PLXNB1O43157 2135 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 PPOXP50336 477 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 H2BFSP57053 126 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 HLA-DRB5Q30154 266 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 FBLN7Q53RD9 439 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SUSD3Q96L08 255 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 COL25A1Q9BXS0 654 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 C5AR2Q9P296 337 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CACFD1Q9UGQ2 172 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 MTCH2Q9Y6C9 303 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 KLRG2A4D1S0 409 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 SIRPB1O00241 398 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 VEGFDO43915 354 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 DEDDO75618 318 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CLDN1O95832 211 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 MDH2P40926 338 aaKnown RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 TNFSF10P50591 281 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 RAC1P63000 192 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 GPM6BQ13491 265 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 IL10RAQ13651 578 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 TRMT12Q53H54 448 aaKnown RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 ZNF385BQ569K4 471 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 FAM78BQ5VT40 261 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 C19orf47Q8N9M1 422 aaKnown RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 PTPMT1Q8WUK0 201 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 ROBO4Q8WZ75 1007 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 P2RX4Q99571 388 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 WDR13Q9H1Z4 485 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 RIMS4Q9H426 269 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 TMEM150CB9EJG8 249 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 GUSBP08236 651 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 PGA4P0DJD7 388 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 PGA5P0DJD9 388 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 NID1P14543 1247 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 NHLH1Q02575 133 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CLEC12BQ2HXU8 276 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 IER5LQ5T953 404 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 ERN2Q76MJ5 926 aaKnown RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 PRR18Q8N4B5 295 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 PPP1R35Q8TAP8 253 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SIGMAR1Q99720 223 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 HSPB9Q9BQS6 159 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 KLF4O43474 513 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CD74P04233 296 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 HKR1P10072 659 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SPINT3P49223 89 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 ERVK-16P61578 105 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 INSL4Q14641 139 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CLEC18BQ6UXF7 455 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 H1FOOQ8IZA3 346 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 OVCA2Q8WZ82 227 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SLAMF6Q96DU3 332 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 UTP23Q9BRU9 249 aaKnown RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 GLIS2Q9BZE0 524 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 SLC26A1Q9H2B4 701 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 IL36AQ9UHA7 158 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 PDE6DO43924 150 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SYNGR4O95473 234 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 ANKRD34CP0C6C1 535 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 TMIGD3P0DMS9 266 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 DMKNQ6E0U4 476 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 IGSF8Q969P0 613 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 MAP1LC3CQ9BXW4 147 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SRD5A3Q9H8P0 318 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SEBOXQ9HB31 216 aaPredicted RBP4.54□□□□□ -1.68
SKP1-202ENST00000353411 PLEK2Q9NYT0 353 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 SLC5A6Q9Y289 635 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 DRGXA6NNA5 263 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 MT-ND6P03923 174 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 CTXN2P0C2S0 81 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
SKP1-202ENST00000353411 FZD5Q13467 585 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms