RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CHRM2P08172 466 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ASAH2BP0C7U1 165 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SLC35E2P0CK97 266 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 HIST1H1DP16402 221 aaKnown RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 FSTP19883 344 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 BCKDHBP21953 392 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 PTGER4P35408 488 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 RPL23AP62750 156 aaKnown RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 EGR4Q05215 589 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF141Q15928 474 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 NKAIN1Q4KMZ8 207 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 AGBL4Q5VU57 503 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SLC25A24Q6NUK1 477 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 FBXW12Q6X9E4 464 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 MAMDC2Q7Z304 686 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 RNF144BQ7Z419 303 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ATG4DQ86TL0 474 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 LRP11Q86VZ4 500 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM123Q8N131 208 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 M1APQ8TC57 530 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 NEU1Q99519 415 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 HIST1H2BLQ99880 126 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 TIMM29Q9BSF4 260 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF2Q9BSG1 426 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 URM1Q9BTM9 101 aaKnown RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ABHD14AQ9BUJ0 271 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 LYRM4Q9HD34 91 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 PRODH2Q9UF12 536 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 IL17BQ9UHF5 180 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 GAB2Q9UQC2 676 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 TMED3Q9Y3Q3 217 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 HEBP2Q9Y5Z4 205 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 WSB1Q9Y6I7 421 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 DOCK8Q8NF50 2099 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 A6NIZ1 184 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 FIGNL2A6NMB9 653 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 A8MVM7 634 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 CYR61O00622 381 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF264O43296 627 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 CEACAM5P06731 702 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 MPZP25189 248 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 BLVRBP30043 206 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 OR3A4PP47883 348 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 RAP1BP61224 184 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 RPL27P61353 136 aaKnown RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 RAB11AP62491 216 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SP3Q02447 781 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 FMODQ06828 376 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 TNFRSF9Q07011 255 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 BATFQ16520 125 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 PLAC9Q5JTB6 97 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 FDX2Q6P4F2 183 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 GRASPQ7Z6J2 395 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF440Q8IYI8 595 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 CA13Q8N1Q1 262 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SUMF1Q8NBK3 374 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 C16orf52Q8NHV5 167 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 CCL4L1Q8NHW4 92 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 GPBAR1Q8TDU6 330 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 PTX4Q96A99 478 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ANKRD9Q96BM1 317 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ADOQ96SZ5 270 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 GPR87Q9BY21 358 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SLC25A31Q9H0C2 315 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SLC7A11Q9UPY5 501 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 SLC5A6Q9Y289 635 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 NUP210LQ5VU65 1888 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 ATG2AQ2TAZ0 1938 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 CDC14CA4D256 554 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 LINC01553A4QN01 128 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 RAD51DO75771 328 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 CISD3P0C7P0 127 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 HSD11B1P28845 292 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 THBS4P35443 961 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 RND3P61587 244 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 GNMTQ14749 295 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF77Q15935 545 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 PHLDA2Q53GA4 152 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 MEX3BQ6ZN04 569 aaKnown RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 ABHD12BQ7Z5M8 362 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF664Q8N3J9 261 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 KCNG3Q8TAE7 436 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 MVB12AQ96EY5 273 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 LPAR5Q9H1C0 372 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 TLCD2A6NGC4 264 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 C17orf51A8MQB3 221 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 HIDE1A8MVS5 230 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 FTCDNL1E5RQL4 147 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
BRCA1-201ENST00000352993 OR5H8P0DN80 308 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 P2RY1P47900 373 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 TAS2R46P59540 309 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 SLC10A1Q14973 349 aa6.75□□□□□ -1.33
BRCA1-201ENST00000352993 VAX1Q5SQQ9 334 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms