RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 V9GYS6 101 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 STMND1H3BQB6 276 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 LRP3O75074 770 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 ZFAND5O76080 213 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 HEXAP06865 529 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 LSM6P62312 80 aaKnown RBP21.52■■□□□ 1.04
CPNE1-202ENST00000352393 CHRFAM7AQ494W8 412 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 CPEB2Q7Z5Q1 589 aaKnown RBP21.52■■□□□ 1.04
CPNE1-202ENST00000352393 ZFP57Q9NU63 452 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 GSKIPQ9P0R6 139 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 HDGFL3Q9Y3E1 203 aa21.52■■□□□ 1.04
CPNE1-202ENST00000352393 DKK1O94907 266 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF708P17019 499 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 SERPINA2P20848 420 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 ACY1Q03154 408 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 RBM39Q14498 530 aaKnown RBP21.52■■□□□ 1.03
CPNE1-202ENST00000352393 UBE2V2Q15819 145 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF528Q3MIS6 628 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 TMEM268Q5VZI3 342 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 EIF5AL1Q6IS14 154 aaKnown RBP21.52■■□□□ 1.03
CPNE1-202ENST00000352393 DTX1Q86Y01 620 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 FADS6Q8N9I5 356 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 TAF9BQ9HBM6 251 aa21.52■■□□□ 1.03
CPNE1-202ENST00000352393 C14orf166Q9Y224 244 aaKnown RBP21.52■■□□□ 1.03
CPNE1-202ENST00000352393 VCANP13611 3396 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 A0A0U1RQV5 110 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 IFNA2P01563 188 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 RCC1P18754 421 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-202ENST00000352393 RAB13P51153 203 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 TMEM176BQ3YBM2 270 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-202ENST00000352393 WDSUB1Q8N9V3 476 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 SHDQ96IW2 340 aa21.51■■□□□ 1.03
CPNE1-202ENST00000352393 LAMA1P25391 3075 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 IGKV1D-8A0A087WSZ0 117 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 TOX3O15405 576 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-202ENST00000352393 DHRS3O75911 302 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 SFTPBP07988 381 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 CPT2P23786 658 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 SULT1A2P50226 295 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 ARL6IP1Q15041 203 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 PPA1Q15181 289 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF574Q6ZN55 896 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-202ENST00000352393 Q6ZSR3 168 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 SLC22A8Q8TCC7 542 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 CNTNAP3Q9BZ76 1288 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 CHST5Q9GZS9 411 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF160Q9HCG1 818 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 C1orf123Q9NWV4 160 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 RRP8O43159 456 aaKnown RBP21.5■■□□□ 1.03
CPNE1-202ENST00000352393 MED6O75586 246 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 KNG1P01042 644 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 FAHP16930 419 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 MSR1P21757 451 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 CLDN17P56750 224 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 SPEM2Q0P670 501 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 PP6455Q8WZ26 134 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 SPACA9Q96E40 222 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-202ENST00000352393 LHX6Q9UPM6 363 aa21.5■■□□□ 1.03
CPNE1-202ENST00000352393 TLX3O43711 291 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 RBMXP38159 391 aaKnown RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 ECI1P42126 302 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 SLC35A1P78382 337 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 ENDOGQ14249 297 aaKnown RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 RTL6Q6ICC9 239 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 BTNL8Q6UX41 500 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 OR6C1Q96RD1 312 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 MCTS1Q9ULC4 181 aaKnown RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 CA14Q9ULX7 337 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 FARS2O95363 451 aaKnown RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 NME2P22392 152 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 ADH6P28332 368 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 EIF1P41567 113 aaKnown RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 IAH1Q2TAA2 248 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 C10orf128Q5T292 105 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 OR2A2Q6IF42 318 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 FOXL2NBQ6ZUU3 175 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 HAS2Q92819 552 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 RASL10BQ96S79 203 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 SPSB2Q99619 263 aa21.49■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF701Q9NV72 531 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-202ENST00000352393 MYO7BQ6PIF6 2116 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF98A6NK75 572 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 RNASEK-C17orf49H0YIS7 233 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 SCRG1O75711 98 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 CST4P01036 141 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 CD5P06127 495 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 FCGR2AP12318 317 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 NR2C1P13056 603 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 ZNF385CQ66K41 422 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-202ENST00000352393 DMBX1Q8NFW5 382 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 CPNE2Q96FN4 548 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-202ENST00000352393 PLA2G2EQ9NZK7 142 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 TUBD1Q9UJT1 453 aa21.48■■□□□ 1.03
CPNE1-202ENST00000352393 PCP4L1A6NKN8 68 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 GAPDHP04406 335 aaKnown RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 CTSDP07339 412 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-202ENST00000352393 FCGR3AP08637 254 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 SFTA3P0C7M3 94 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 PHYHD1Q5SRE7 291 aa21.47■■□□□ 1.03
CPNE1-202ENST00000352393 GJC3Q8NFK1 279 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms